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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_01590 and OKGIIK_01595 overlap by 4 nucleotides
OKGIIK_01595 and ispA are separated by 919 nucleotides
ispA and OKGIIK_01605 are separated by 60 nucleotides
OKGIIK_01605 and OKGIIK_01610 are separated by 95 nucleotides
OKGIIK_01590: OKGIIK_01590 - cytochrome B, at 360,668 to 361,246
_01590
OKGIIK_01595: OKGIIK_01595 - Polyisoprenoid-binding protein, at 361,243 to 361,818
_01595
OKGIIK_01600: ispA - octaprenyl-diphosphate synthase, at 362,738 to 363,742
ispA
OKGIIK_01605: OKGIIK_01605 - putative arabinose efflux permease, MFS family, at 363,803 to 365,077
_01605
OKGIIK_01610: OKGIIK_01610 - Sulfurtransferase, at 365,173 to 366,153
_01610
Group
Condition
OKGIIK
_01590
OKGIIK
_01595
OKGIIK
_01600
OKGIIK
_01605
OKGIIK
_01610
ispA
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.6
+0.8
N.D.
-0.4
-0.4
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.3
-0.1
N.D.
-0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.5
+0.5
N.D.
-0.3
-0.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.3
+0.4
N.D.
-0.2
-0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.7
+0.4
N.D.
-0.2
+0.2
no stress control
no stress control
+0.1
+0.2
N.D.
-0.4
-0.0
pH
R2A_PIPES pH 4
-0.8
+0.5
N.D.
-0.3
+0.4
pH
R2A_PIPES pH 4
-0.2
-0.6
N.D.
+0.1
+0.6
no stress control
no stress control
-0.2
+0.1
N.D.
-0.1
+0.2
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
-0.1
N.D.
-0.1
+0.3
no stress control
no stress control
-0.2
+0.2
N.D.
+0.0
+0.0
no stress control
no stress control
-0.5
+0.3
N.D.
-0.0
+0.3
pH
R2A_PIPES pH 4.25
-0.8
+0.4
N.D.
+0.1
+0.6
pH
R2A_PIPES pH 4.5
-0.5
+0.6
N.D.
+0.3
-0.0
no stress control
no stress control
-0.2
+0.7
N.D.
-0.3
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.2
-0.4
N.D.
+0.1
+0.5
no stress control
no stress control
-0.2
+0.6
N.D.
-0.2
+0.2
pH
R2A_PIPES pH 4.5
-0.2
+0.4
N.D.
+0.2
-0.0
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
+0.3
N.D.
+0.2
+0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.1
+0.0
N.D.
+0.1
+0.4
stress
R2A_PIPES with Cadmium chloride 128 uM
-0.4
+0.9
N.D.
-0.3
+0.4
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.3
+1.1
N.D.
-0.1
+0.1
no stress control
no stress control
+0.1
+0.7
N.D.
-0.2
+0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.2
+0.9
N.D.
-0.1
+0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.2
+0.6
N.D.
+0.0
+0.4
pH
R2A_PIPES pH 4.25
-0.4
+0.8
N.D.
+0.2
+0.2
no stress control
no stress control
-0.1
+0.3
N.D.
+0.4
+0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.1
+0.5
N.D.
+0.1
+0.4
no stress control
no stress control
-0.1
+1.2
N.D.
+0.1
+0.5
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