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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
OKGIIK_01580 and yceI are separated by 9 nucleotides
yceI and OKGIIK_01590 overlap by 1 nucleotides
OKGIIK_01590 and OKGIIK_01595 overlap by 4 nucleotides
OKGIIK_01595 and ispA are separated by 919 nucleotides
OKGIIK_01580: OKGIIK_01580 - GTP-binding protein HSR1, at 358,746 to 360,110
_01580
OKGIIK_01585: yceI - polyisoprenoid-binding protein, at 360,120 to 360,668
yceI
OKGIIK_01590: OKGIIK_01590 - cytochrome B, at 360,668 to 361,246
_01590
OKGIIK_01595: OKGIIK_01595 - Polyisoprenoid-binding protein, at 361,243 to 361,818
_01595
OKGIIK_01600: ispA - octaprenyl-diphosphate synthase, at 362,738 to 363,742
ispA
Group
Condition
OKGIIK
_01580
OKGIIK
_01585
OKGIIK
_01590
OKGIIK
_01595
OKGIIK
_01600
yceI
ispA
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.1
-0.4
-0.7
+0.4
N.D.
no stress control
no stress control
+0.2
-0.6
-0.5
+0.3
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
-0.2
-0.2
-0.5
+0.5
N.D.
pH
R2A_PIPES pH 4.25
+0.1
-0.1
-0.8
+0.4
N.D.
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.1
+0.0
-0.1
-0.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.3
-0.5
-0.1
+0.0
N.D.
no stress control
no stress control
-0.1
-0.0
-0.2
+0.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.2
-0.1
-0.3
+0.4
N.D.
pH
R2A_PIPES pH 4
+0.0
+0.6
-0.2
-0.6
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.2
+0.1
-0.6
+0.8
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
-0.2
-0.2
+0.6
N.D.
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
+0.4
+0.1
-0.3
-0.1
N.D.
no stress control
no stress control
-0.1
-0.1
-0.2
+0.6
N.D.
no stress control
no stress control
+0.1
-0.7
+0.1
+0.7
N.D.
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
+0.3
-0.1
-0.3
+0.3
N.D.
pH
R2A_PIPES pH 4
+0.1
+0.4
-0.8
+0.5
N.D.
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.3
+0.2
+0.2
-0.4
N.D.
no stress control
no stress control
-0.0
+0.1
+0.1
+0.2
N.D.
no stress control
no stress control
+0.3
+0.1
-0.2
+0.2
N.D.
pH
R2A_PIPES pH 4.5
+0.3
-0.1
-0.5
+0.6
N.D.
pH
R2A_PIPES pH 4.5
-0.2
+0.5
-0.2
+0.4
N.D.
no stress control
no stress control
+0.3
+0.3
-0.1
+0.3
N.D.
no stress control
no stress control
+0.2
+0.2
-0.2
+0.7
N.D.
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.1
+0.3
-0.3
+1.1
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.3
-0.0
+0.1
+0.5
N.D.
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.4
-0.1
-0.2
+0.9
N.D.
pH
R2A_PIPES pH 4.25
+0.3
+0.4
-0.4
+0.8
N.D.
no stress control
no stress control
+0.1
+0.1
-0.1
+1.2
N.D.
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.4
+0.6
-0.4
+0.9
N.D.
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