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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
fabG and OKGIIK_00890 are separated by 198 nucleotides
OKGIIK_00890 and nirK are separated by 127 nucleotides
nirK and OKGIIK_00900 are separated by 2 nucleotides
OKGIIK_00900 and OKGIIK_00905 are separated by 10 nucleotides
OKGIIK_00885: fabG - short-chain dehydrogenase, at 194,486 to 195,247
fabG
OKGIIK_00890: OKGIIK_00890 - Short-chain dehydrogenase, at 195,446 to 196,693
_00890
OKGIIK_00895: nirK - copper-containing nitrite reductase, at 196,821 to 198,347
nirK
OKGIIK_00900: OKGIIK_00900 - FGE-sulfatase domain-containing protein, at 198,350 to 199,114
_00900
OKGIIK_00905: OKGIIK_00905 - Electron transporter SenC, at 199,125 to 199,697
_00905
Group
Condition
OKGIIK
_00885
OKGIIK
_00890
OKGIIK
_00895
OKGIIK
_00900
OKGIIK
_00905
fabG
nirK
no stress control
no stress control
-0.5
+0.3
+0.2
+0.2
-1.8
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.3
-0.3
-0.1
-0.1
-0.4
no stress control
no stress control
-0.6
+0.1
+0.0
-0.1
-0.4
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
-0.5
+0.0
+0.1
+0.1
-0.4
stress
R2A_PIPES with Cobalt chloride 512 uM
-0.5
-0.1
+0.0
+0.2
-0.1
no stress control
no stress control
-0.4
+0.1
-0.1
-0.0
-0.1
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
-0.0
-0.0
+0.1
+0.1
-0.6
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
-0.2
+0.0
-0.0
+0.2
-0.3
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
+0.3
-0.0
+0.0
-0.0
-0.4
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.0
+0.2
+0.0
+0.2
-0.5
stress
R2A_PIPES with Nickel (II) chloride 424 uM
-0.4
-0.1
+0.1
+0.2
+0.4
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.1
+0.3
+0.1
+0.1
-0.4
stress
R2A_PIPES with Cobalt chloride 512 uM
+0.1
+0.0
+0.0
+0.2
-0.2
no stress control
no stress control
+0.0
+0.2
+0.1
+0.1
-0.2
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
+0.0
+0.1
+0.0
+0.3
-0.2
no stress control
no stress control
+0.2
+0.2
+0.0
+0.3
-0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
-0.2
+0.1
+0.2
+0.3
+0.1
pH
R2A_PIPES pH 4
+0.1
-0.0
+0.1
+0.3
+0.0
pH
R2A_PIPES pH 4.5
+0.1
+0.3
+0.2
+0.1
+0.0
pH
R2A_PIPES pH 4
-0.1
+0.2
+0.2
+0.4
+0.1
pH
R2A_PIPES pH 4.25
-0.0
+0.3
+0.1
+0.4
+0.1
no stress control
no stress control
+0.3
+0.3
+0.2
+0.2
-0.1
no stress control
no stress control
+0.3
+0.3
+0.1
+0.2
-0.0
no stress control
no stress control
+0.0
-0.0
+0.1
+0.6
+0.2
stress
R2A_PIPES with Cadmium chloride 128 uM
+0.3
+0.3
+0.0
+0.4
-0.0
no stress control
no stress control
+0.3
+0.1
+0.1
+0.3
+0.1
stress
R2A_PIPES with Cobalt chloride 1024 uM
+0.4
+0.2
+0.1
+0.5
-0.1
pH
R2A_PIPES pH 4.25
+0.5
+0.2
+0.2
+0.3
+0.2
pH
R2A_PIPES pH 4.5
+0.8
+0.0
+0.1
+0.3
+0.3
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