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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodanobacter sp. FW510-T8
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Top 29 experiments (either direction), sorted by average fitness
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500 nt
rodA and OKGIIK_00065 are separated by 121 nucleotides
OKGIIK_00065 and OKGIIK_00070 overlap by 4 nucleotides
OKGIIK_00070 and OKGIIK_00075 overlap by 4 nucleotides
OKGIIK_00075 and mltB are separated by 197 nucleotides
OKGIIK_00060: rodA - rod shape-determining protein RodA, at 13,666 to 14,781
rodA
OKGIIK_00065: OKGIIK_00065 - Gluconate 2-dehydrogenase, at 14,903 to 15,610
_00065
OKGIIK_00070: OKGIIK_00070 - GMC family oxidoreductase, at 15,607 to 17,382
_00070
OKGIIK_00075: OKGIIK_00075 - Alcohol dehydrogenase, at 17,379 to 18,758
_00075
OKGIIK_00080: mltB - lytic murein transglycosylase B, at 18,956 to 19,957
mltB
Group
Condition
OKGIIK
_00060
OKGIIK
_00065
OKGIIK
_00070
OKGIIK
_00075
OKGIIK
_00080
rodA
mltB
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
+0.0
-0.1
+0.1
-1.0
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
-0.2
-0.2
+0.0
-0.7
stress
R2A_PIPES with Cobalt chloride 1024 uM
N.D.
+0.1
+0.0
-0.1
-0.8
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 2 x
N.D.
+0.0
-0.1
-0.0
-0.6
no stress control
no stress control
N.D.
+0.1
-0.0
+0.1
-0.7
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.1
-0.0
-0.0
-0.5
no stress control
no stress control
N.D.
-0.0
+0.0
+0.0
-0.4
no stress control
no stress control
N.D.
+0.0
+0.0
-0.0
-0.4
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
+0.3
-0.1
-0.0
-0.6
no stress control
no stress control
N.D.
-0.0
+0.1
+0.1
-0.5
no stress control
no stress control
N.D.
-0.0
+0.1
+0.1
-0.4
pH
R2A_PIPES pH 4.25
N.D.
-0.1
-0.1
-0.0
-0.0
pH
R2A_PIPES pH 4
N.D.
-0.1
+0.0
+0.1
-0.3
no stress control
no stress control
N.D.
-0.0
+0.1
+0.1
-0.4
stress
R2A_PIPES with Nickel (II) chloride 424 uM
N.D.
+0.0
+0.1
+0.1
-0.3
stress
R2A_PIPES with Cadmium chloride 128 uM
N.D.
+0.0
+0.0
+0.2
-0.3
pH
R2A_PIPES pH 4.5
N.D.
+0.0
+0.1
+0.0
-0.2
no stress control
no stress control
N.D.
-0.1
+0.2
+0.1
-0.2
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.1
+0.0
+0.1
-0.3
stress
R2A_PIPES with Aluminum chloride 0.28125 mM
N.D.
+0.2
+0.1
+0.0
-0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
+0.1
-0.0
+0.2
-0.4
pH
R2A_PIPES pH 4
N.D.
-0.1
+0.1
-0.0
-0.0
pH
R2A_PIPES pH 4.5
N.D.
-0.0
+0.0
+0.0
-0.1
stress
R2A_PIPES with Cobalt chloride 512 uM
N.D.
+0.3
+0.1
+0.1
-0.6
no stress control
no stress control
N.D.
+0.1
+0.1
+0.2
-0.4
stress
R2A_PIPES with Metal_ion_mix_sitestressplate 0.5 x
N.D.
+0.1
+0.0
+0.1
-0.2
pH
R2A_PIPES pH 4.25
N.D.
+0.1
+0.1
+0.1
-0.1
stress
R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
N.D.
+0.0
+0.1
+0.2
-0.2
no stress control
no stress control
N.D.
+0.0
+0.1
+0.2
-0.2
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