Fitness for 5 genes in Escherichia coli ECRC100

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500 ntldtE and lpp are separated by 62 nucleotideslpp and pykF are separated by 310 nucleotidespykF and fumD are separated by 556 nucleotidesfumD and ydhY are separated by 455 nucleotides OKFHMN_27280: ldtE - L,D-transpeptidase LdtE, at 5,251,984 to 5,252,988 ldtE OKFHMN_27285: lpp - murein lipoprotein Lpp, at 5,253,051 to 5,253,287 lpp OKFHMN_27290: pykF - pyruvate kinase PykF, at 5,253,598 to 5,255,010 pykF OKFHMN_27295: fumD - fumarate hydratase FumD, at 5,255,567 to 5,255,776 fumD OKFHMN_27300: ydhY - ferredoxin-like protein, at 5,256,232 to 5,256,858 ydhY
Group Condition OKFHMN_27280 OKFHMN_27285 OKFHMN_27290 OKFHMN_27295 OKFHMN_27300
ldtE lpp pykF fumD ydhY
phage JK42 +0.2 -4.3 N.D. -0.9 -0.3
phage EV146 -0.0 -4.1 N.D. -1.3 +0.3
phage JK42 +0.1 -4.2 N.D. -0.3 -0.3
phage Bas09 +0.2 -4.4 N.D. -0.5 +0.1
phage EV146 -0.2 -4.1 N.D. -0.1 +0.1
carbon source Sodium-DL-Lactate -0.3 -1.4 N.D. +0.2 -1.8
carbon source L-Arabinose +0.1 -0.5 N.D. -1.5 -0.2
carbon source Casamino-acids -0.3 -0.7 N.D. +0.0 +0.4
phage Bas69 +0.5 +0.1 N.D. -0.3 -0.6
carbon source D-Glucose -0.5 -1.5 N.D. +1.2 +0.8
phage Bas69 +0.3 -0.1 N.D. +0.4 -0.3
phage Bas58 +0.5 +0.0 N.D. +0.1 -0.3
carbon source L-Arabinose -0.1 -0.1 N.D. +0.6 +0.4
carbon source Casamino-acids -1.0 -0.3 N.D. +0.5 +1.9
carbon source D-Glucose +0.4 -0.4 N.D. +0.3 +1.0
phage Bas58 +0.4 +0.4 N.D. +0.0 +0.5
carbon source Sodium-DL-Lactate +1.0 -0.1 N.D. +0.8 +0.1
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