Fitness for 5 genes in Escherichia coli ECRC100

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500 ntnimR and yeaL overlap by 44 nucleotidesyeaL and yeaK are separated by 274 nucleotidesyeaK and dgcJ are separated by 42 nucleotidesdgcJ and cdgI are separated by 180 nucleotides OKFHMN_26680: nimR - DNA-binding transcriptional regulator NimR, at 5,133,241 to 5,134,059 nimR OKFHMN_26685: yeaL - UPF0756 membrane protein CKO_01811, at 5,134,016 to 5,134,462 yeaL OKFHMN_26690: yeaK - mischarged aminoacyl-tRNA deacylase, at 5,134,737 to 5,135,240 yeaK OKFHMN_26695: dgcJ - diguanylate cyclase DgcJ, at 5,135,283 to 5,136,773 dgcJ OKFHMN_26700: cdgI - putative diguanylate cyclase CdgI, at 5,136,954 to 5,138,297 cdgI
Group Condition OKFHMN_26680 OKFHMN_26685 OKFHMN_26690 OKFHMN_26695 OKFHMN_26700
nimR yeaL yeaK dgcJ cdgI
phage EV146 -0.1 N.D. -2.0 -0.0 -0.1
carbon source D-Glucose -0.7 N.D. -0.2 -0.2 -0.2
phage Bas69 +0.5 N.D. -1.4 +1.6 -1.6
phage Bas58 +0.1 N.D. -0.6 +0.9 -1.1
carbon source D-Glucose +0.2 N.D. -0.3 -0.2 -0.1
carbon source L-Arabinose -0.3 N.D. -0.3 +0.1 +0.2
carbon source Sodium-DL-Lactate +0.3 N.D. -0.5 +0.3 -0.4
carbon source Casamino-acids +0.1 N.D. -0.5 +0.4 -0.2
phage Bas69 -0.1 N.D. -0.0 +1.6 -1.5
carbon source Sodium-DL-Lactate +0.3 N.D. +0.4 -0.4 -0.1
phage Bas58 +0.6 N.D. -0.7 +1.3 -0.5
phage JK42 +0.3 N.D. +0.1 +0.7 -0.4
phage EV146 +0.5 N.D. +0.2 +0.2 +0.1
carbon source Casamino-acids +0.7 N.D. +0.5 +0.3 -0.1
carbon source L-Arabinose +0.3 N.D. +0.2 +0.2 +0.7
phage Bas09 +0.5 N.D. -0.1 +0.4 +0.7
phage JK42 +1.1 N.D. -0.2 +0.6 +0.1
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OKFHMN_26680
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OKFHMN_26685
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