Fitness for 5 genes in Escherichia coli ECRC100

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500 ntcsgD and OKFHMN_19815 are separated by 703 nucleotidesOKFHMN_19815 and OKFHMN_19820 are separated by 13 nucleotidesOKFHMN_19820 and sctI are separated by 19 nucleotidessctI and escJ overlap by 4 nucleotides OKFHMN_19810: csgD - LuxR family transcriptional regulator, at 3,853,913 to 3,854,413 csgD OKFHMN_19815: OKFHMN_19815 - Type III secretion protein EprH, at 3,855,117 to 3,855,851 _19815 OKFHMN_19820: OKFHMN_19820 - type III secretion system needle complex protein, at 3,855,865 to 3,856,104 _19820 OKFHMN_19825: sctI - type III secretion system inner rod subunit SctI, at 3,856,124 to 3,856,456 sctI OKFHMN_19830: escJ - EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein, at 3,856,453 to 3,857,187 escJ
Group Condition OKFHMN_19810 OKFHMN_19815 OKFHMN_19820 OKFHMN_19825 OKFHMN_19830
csgD sctI escJ
phage Bas69 N.D. -1.6 -0.2 N.D. N.D.
carbon source L-Arabinose N.D. -0.2 -1.2 N.D. N.D.
carbon source Sodium-DL-Lactate N.D. -0.4 -0.7 N.D. N.D.
carbon source Casamino-acids N.D. -0.1 -0.7 N.D. N.D.
carbon source D-Glucose N.D. +0.3 -1.1 N.D. N.D.
carbon source D-Glucose N.D. -0.1 -0.7 N.D. N.D.
phage Bas69 N.D. -0.8 +0.3 N.D. N.D.
carbon source Casamino-acids N.D. +0.2 -0.6 N.D. N.D.
phage Bas09 N.D. -0.1 -0.3 N.D. N.D.
phage Bas58 N.D. -0.2 -0.2 N.D. N.D.
phage JK42 N.D. -0.4 +0.1 N.D. N.D.
phage EV146 N.D. -0.5 +0.3 N.D. N.D.
phage EV146 N.D. -0.5 +0.4 N.D. N.D.
phage Bas58 N.D. -0.1 +0.1 N.D. N.D.
phage JK42 N.D. +0.0 +0.1 N.D. N.D.
carbon source Sodium-DL-Lactate N.D. +0.2 +0.1 N.D. N.D.
carbon source L-Arabinose N.D. +0.3 +0.1 N.D. N.D.
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