Fitness for 5 genes in Escherichia coli ECRC100

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500 ntsctT and flhB are separated by 8 nucleotidesflhB and csgD are separated by 356 nucleotidescsgD and OKFHMN_19815 are separated by 703 nucleotidesOKFHMN_19815 and OKFHMN_19820 are separated by 13 nucleotides OKFHMN_19800: sctT - type III secretion system export apparatus subunit SctT, at 3,852,190 to 3,852,426 sctT OKFHMN_19805: flhB - EscU/YscU/HrcU family type III secretion system export apparatus switch protein, at 3,852,435 to 3,853,556 flhB OKFHMN_19810: csgD - LuxR family transcriptional regulator, at 3,853,913 to 3,854,413 csgD OKFHMN_19815: OKFHMN_19815 - Type III secretion protein EprH, at 3,855,117 to 3,855,851 _19815 OKFHMN_19820: OKFHMN_19820 - type III secretion system needle complex protein, at 3,855,865 to 3,856,104 _19820
Group Condition OKFHMN_19800 OKFHMN_19805 OKFHMN_19810 OKFHMN_19815 OKFHMN_19820
sctT flhB csgD
carbon source L-Arabinose -1.8 -5.3 N.D. -0.2 -1.2
phage Bas69 +0.5 -0.9 N.D. -1.6 -0.2
carbon source Sodium-DL-Lactate +0.2 -2.4 N.D. +0.2 +0.1
phage Bas09 -0.1 -0.6 N.D. -0.1 -0.3
phage Bas69 -0.1 -0.5 N.D. -0.8 +0.3
phage EV146 +0.1 -0.8 N.D. -0.5 +0.3
carbon source Casamino-acids +1.1 -1.1 N.D. -0.1 -0.7
carbon source Sodium-DL-Lactate +1.0 -0.7 N.D. -0.4 -0.7
carbon source D-Glucose +0.7 -0.6 N.D. -0.1 -0.7
phage Bas58 +0.5 -0.9 N.D. -0.1 +0.1
phage Bas58 -0.2 +0.4 N.D. -0.2 -0.2
phage JK42 -0.1 +0.4 N.D. -0.4 +0.1
carbon source Casamino-acids +1.2 -0.7 N.D. +0.2 -0.6
carbon source D-Glucose +1.0 +0.2 N.D. +0.3 -1.1
phage JK42 +1.2 -0.1 N.D. +0.0 +0.1
carbon source L-Arabinose +0.7 +0.2 N.D. +0.3 +0.1
phage EV146 +1.2 +0.5 N.D. -0.5 +0.4
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