Fitness for 5 genes in Escherichia coli ECRC100

Add gene:

Number of genes on each side:  

Top 17 experiments (either direction), sorted by average fitness

Or view all 17 experiments or choose conditions or try the comparative fitness browser

500 ntOKFHMN_17935 and rpoN are separated by 22 nucleotidesrpoN and lptB are separated by 47 nucleotideslptB and lptA are separated by 6 nucleotideslptA and lptC overlap by 32 nucleotides OKFHMN_17935: OKFHMN_17935 - Ribosome hibernation promoting factor, at 3,487,583 to 3,487,870 _17935 OKFHMN_17940: rpoN - RNA polymerase factor sigma-54, at 3,487,893 to 3,489,326 rpoN OKFHMN_17945: lptB - LPS export ABC transporter ATP-binding protein, at 3,489,374 to 3,490,099 lptB OKFHMN_17950: lptA - lipopolysaccharide ABC transporter substrate-binding protein LptA, at 3,490,106 to 3,490,663 lptA OKFHMN_17955: lptC - LPS export ABC transporter periplasmic protein LptC, at 3,490,632 to 3,491,207 lptC
Group Condition OKFHMN_17935 OKFHMN_17940 OKFHMN_17945 OKFHMN_17950 OKFHMN_17955
rpoN lptB lptA lptC
phage JK42 -0.0 N.D. N.D. N.D. -2.1
phage EV146 -0.0 N.D. N.D. N.D. -1.7
phage JK42 -0.1 N.D. N.D. N.D. -1.7
phage EV146 +0.3 N.D. N.D. N.D. -1.7
carbon source L-Arabinose -0.3 N.D. N.D. N.D. -0.2
phage Bas58 +0.1 N.D. N.D. N.D. -0.3
phage Bas58 +0.2 N.D. N.D. N.D. -0.2
phage Bas69 +0.2 N.D. N.D. N.D. -0.2
phage Bas69 +0.0 N.D. N.D. N.D. -0.0
carbon source Sodium-DL-Lactate +0.0 N.D. N.D. N.D. +0.0
phage Bas09 +0.2 N.D. N.D. N.D. -0.1
carbon source Casamino-acids +0.1 N.D. N.D. N.D. +0.2
carbon source Sodium-DL-Lactate -0.2 N.D. N.D. N.D. +0.5
carbon source Casamino-acids -0.0 N.D. N.D. N.D. +0.4
carbon source D-Glucose +0.0 N.D. N.D. N.D. +0.4
carbon source L-Arabinose +0.1 N.D. N.D. N.D. +0.3
carbon source D-Glucose -0.0 N.D. N.D. N.D. +0.5
remove
OKFHMN_17935
plot		 remove
OKFHMN_17940
plot		 remove
OKFHMN_17945		 remove
OKFHMN_17950
plot		 remove
OKFHMN_17955
plot