Fitness for 5 genes in Escherichia coli ECRC100

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500 ntgrlA and cesD are separated by 383 nucleotidescesD and escC are separated by 13 nucleotidesescC and sepD overlap by 1 nucleotidessepD and escJ are separated by 5 nucleotides OKFHMN_15320: grlA - type III secretion system LEE transcriptional regulator GrlA, at 2,960,899 to 2,961,312 grlA OKFHMN_15325: cesD - SycD/LcrH family type III secretion system chaperone CesD, at 2,961,696 to 2,962,151 cesD OKFHMN_15330: escC - type III secretion system LEE outer membrane ring protein EscC, at 2,962,165 to 2,963,703 escC OKFHMN_15335: sepD - type III secretion system LEE switch protein SepD, at 2,963,703 to 2,964,158 sepD OKFHMN_15340: escJ - type III secretion system LEE inner membrane ring protein EscJ, at 2,964,164 to 2,964,736 escJ
Group Condition OKFHMN_15320 OKFHMN_15325 OKFHMN_15330 OKFHMN_15335 OKFHMN_15340
grlA cesD escC sepD escJ
carbon source L-Arabinose -0.5 +0.1 -0.2 +0.3 -4.8
phage Bas58 -0.4 +0.4 +0.2 +0.6 -2.7
carbon source D-Glucose -0.0 -0.1 -0.1 -0.4 -1.0
carbon source D-Glucose -0.3 +0.4 +0.0 -0.3 -0.5
carbon source Casamino-acids -0.1 +0.3 -0.4 +0.1 -0.4
carbon source L-Arabinose -0.1 +0.5 +0.2 +0.1 -1.2
phage JK42 -0.1 -0.4 -0.2 +0.3 +0.0
phage EV146 +0.5 -0.1 +0.2 +0.2 -1.0
carbon source Sodium-DL-Lactate +0.1 -0.1 -0.3 +0.1 +0.2
carbon source Casamino-acids -0.1 +0.1 +0.2 -0.8 +0.6
phage Bas69 +0.8 +0.2 -0.0 +0.2 -1.1
phage Bas09 -0.0 -0.1 +0.1 -0.4 +0.7
phage JK42 +0.1 +0.1 +0.3 -0.4 +0.1
carbon source Sodium-DL-Lactate +0.4 +0.3 -0.3 -0.2 +0.1
phage EV146 +0.3 +0.1 +0.1 +0.2 -0.3
phage Bas58 +0.3 +0.5 +0.1 +0.6 -1.0
phage Bas69 -0.0 +0.2 +0.1 +0.2 +0.6
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OKFHMN_15320
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OKFHMN_15325
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