Fitness for 5 genes in Escherichia coli ECRC100

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500 ntleuC1 and leuD are separated by 10 nucleotidesleuD and sgrR are separated by 327 nucleotidessgrR and OKFHMN_10745 are separated by 155 nucleotidesOKFHMN_10745 and espY2 overlap by 35 nucleotides OKFHMN_10725: leuC1 - 3-isopropylmalate dehydratase large subunit 1, at 2,017,720 to 2,019,120 leuC1 OKFHMN_10730: leuD - 3-isopropylmalate dehydratase small subunit, at 2,019,131 to 2,019,736 leuD OKFHMN_10740: sgrR - DNA-binding transcriptional regulator SgrR, at 2,020,064 to 2,021,722 sgrR OKFHMN_10745: OKFHMN_10745 - hypothetical protein, at 2,021,878 to 2,021,985 _10745 OKFHMN_10750: espY2 - T3SS effector EspY2, at 2,021,951 to 2,022,520 espY2
Group Condition OKFHMN_10725 OKFHMN_10730 OKFHMN_10740 OKFHMN_10745 OKFHMN_10750
leuC1 leuD sgrR espY2
carbon source L-Arabinose -6.8 -8.2 +0.2 N.D. +0.2
carbon source Sodium-DL-Lactate -5.1 -8.8 +0.1 N.D. -0.2
carbon source D-Glucose -7.2 -5.9 -0.1 N.D. -0.1
carbon source Sodium-DL-Lactate -5.1 -5.6 -0.1 N.D. -0.2
carbon source D-Glucose -5.4 -4.4 -0.1 N.D. -0.5
carbon source L-Arabinose -5.9 -4.7 +0.1 N.D. +0.1
phage JK42 +0.0 +0.1 -0.1 N.D. +0.1
phage JK42 +0.0 -0.1 +0.1 N.D. +0.2
phage Bas58 +0.1 +0.0 +0.1 N.D. +0.0
phage EV146 +0.1 +0.2 +0.0 N.D. +0.0
phage Bas69 -0.0 -0.1 +0.1 N.D. +0.3
phage Bas58 +0.1 +0.2 +0.1 N.D. +0.1
phage EV146 +0.2 -0.3 +0.3 N.D. +0.3
carbon source Casamino-acids +0.1 +0.4 +0.1 N.D. -0.0
phage Bas09 +0.2 +0.3 +0.1 N.D. +0.1
carbon source Casamino-acids +0.1 +0.6 +0.0 N.D. -0.1
phage Bas69 +0.3 -0.0 +0.3 N.D. +0.5
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