Fitness for 5 genes in Escherichia coli ECRC100

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500 ntyciO and yciV overlap by 4 nucleotidesyciV and trpL are separated by 137 nucleotidestrpL and trpE are separated by 91 nucleotidestrpE and trpD overlap by 1 nucleotides OKFHMN_02640: yciO - L-threonylcarbamoyladenylate synthase, at 419,177 to 419,797 yciO OKFHMN_02645: yciV - 5'-3' exoribonuclease, at 419,794 to 420,675 yciV OKFHMN_02650: trpL - trp operon leader peptide, at 420,813 to 420,857 trpL OKFHMN_02655: trpE - anthranilate synthase component I, at 420,949 to 422,511 trpE OKFHMN_02660: trpD - bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD, at 422,511 to 424,106 trpD
Group Condition OKFHMN_02640 OKFHMN_02645 OKFHMN_02650 OKFHMN_02655 OKFHMN_02660
yciO yciV trpL trpE trpD
carbon source Casamino-acids -1.3 -0.2 +0.1 -2.4 -3.0
carbon source Casamino-acids +0.1 +0.5 +0.1 -4.8 -1.9
carbon source D-Glucose -0.5 -0.2 +1.3 -3.3 -2.7
carbon source L-Arabinose -1.1 -0.5 +0.7 -2.3 -2.3
carbon source Sodium-DL-Lactate -0.8 -0.2 +0.5 -3.3 -1.5
carbon source D-Glucose -0.9 +0.7 +0.5 -3.3 -2.1
carbon source L-Arabinose -0.5 +0.0 +0.9 -2.0 -2.2
carbon source Sodium-DL-Lactate -0.2 -0.2 +1.5 -1.7 -2.2
phage JK42 -0.2 -0.6 -0.1 -0.0 -0.3
phage JK42 -0.9 +0.2 +0.4 -0.5 -0.1
phage Bas09 -1.2 +0.7 +0.3 +0.2 -0.7
phage Bas69 -0.5 -0.2 +0.2 +0.2 +0.3
phage Bas58 +0.4 +0.4 +0.4 -0.3 +0.2
phage EV146 +0.3 +0.2 +0.6 +0.4 -0.3
phage Bas58 +1.3 -0.0 +0.6 -0.2 -0.4
phage Bas69 +0.3 +0.5 +1.0 +0.2 -0.4
phage EV146 -0.0 +0.5 +1.1 +0.1 +0.3
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