Fitness for 5 genes in Escherichia coli ECRC100

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500 ntuxaB and yneE are separated by 196 nucleotidesyneE and tam are separated by 3 nucleotidestam and lsrG are separated by 56 nucleotideslsrG and lsrF are separated by 23 nucleotides OKFHMN_01130: uxaB - tagaturonate reductase, at 114,014 to 115,465 uxaB OKFHMN_01135: yneE - UPF0187 protein YneE, at 115,662 to 116,576 yneE OKFHMN_01140: tam - trans-aconitate 2-methyltransferase, at 116,580 to 117,338 tam OKFHMN_01145: lsrG - (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase, at 117,395 to 117,685 lsrG OKFHMN_01150: lsrF - 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase, at 117,709 to 118,584 lsrF
Group Condition OKFHMN_01130 OKFHMN_01135 OKFHMN_01140 OKFHMN_01145 OKFHMN_01150
uxaB yneE tam lsrG lsrF
carbon source L-Arabinose +0.1 -0.2 N.D. N.D. N.D.
carbon source Casamino-acids +0.5 -0.4 N.D. N.D. N.D.
carbon source Casamino-acids +0.2 +0.1 N.D. N.D. N.D.
phage EV146 -0.7 +1.0 N.D. N.D. N.D.
phage JK42 +0.3 +0.1 N.D. N.D. N.D.
phage Bas69 +0.3 +0.1 N.D. N.D. N.D.
carbon source Sodium-DL-Lactate +0.6 -0.2 N.D. N.D. N.D.
phage Bas58 +0.4 +0.2 N.D. N.D. N.D.
phage JK42 +0.3 +0.4 N.D. N.D. N.D.
phage Bas09 +0.4 +0.5 N.D. N.D. N.D.
phage EV146 +0.6 +0.3 N.D. N.D. N.D.
phage Bas69 +0.4 +0.5 N.D. N.D. N.D.
carbon source L-Arabinose +0.4 +0.6 N.D. N.D. N.D.
carbon source D-Glucose +0.9 +0.0 N.D. N.D. N.D.
carbon source D-Glucose +1.2 -0.2 N.D. N.D. N.D.
carbon source Sodium-DL-Lactate +0.8 +0.2 N.D. N.D. N.D.
phage Bas58 +0.7 +0.5 N.D. N.D. N.D.
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OKFHMN_01130
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