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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli HS(pFamp)R (ATCC 700891)
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OHPLBJKB_01132 and OHPLBJKB_01133 overlap by 16 nucleotides
OHPLBJKB_01133 and OHPLBJKB_01134 are separated by 407 nucleotides
OHPLBJKB_01134 and OHPLBJKB_01135 are separated by 32 nucleotides
OHPLBJKB_01135 and OHPLBJKB_01136 overlap by 1 nucleotides
OHPLBJKB_01132: OHPLBJKB_01132 - tRNA1(Val) (adenine(37)-N6)-methyltransferase, at 1,159,526 to 1,160,263
_01132
OHPLBJKB_01133: OHPLBJKB_01133 - L-aspartate oxidase, at 1,160,248 to 1,161,870
_01133
OHPLBJKB_01134: OHPLBJKB_01134 - ECF RNA polymerase sigma-E factor, at 1,162,278 to 1,162,853
_01134
OHPLBJKB_01135: OHPLBJKB_01135 - Anti-sigma-E factor RseA, at 1,162,886 to 1,163,536
_01135
OHPLBJKB_01136: OHPLBJKB_01136 - Sigma-E factor regulatory protein RseB, at 1,163,536 to 1,164,492
_01136
Group
Condition
OHPLBJKB
_01132
OHPLBJKB
_01133
OHPLBJKB
_01134
OHPLBJKB
_01135
OHPLBJKB
_01136
phage
T3 MOI10
-0.3
-0.2
N.D.
-2.8
-0.2
phage
T4 MOI10
-0.2
-0.2
N.D.
-2.7
-0.1
phage
Sew9
-0.3
-0.0
N.D.
-2.6
-0.1
phage
LZ4
+0.2
+0.1
N.D.
-3.1
-0.1
phage
lib only
-0.1
-0.1
N.D.
-2.6
-0.0
phage
HB-P24 MOI10
-0.0
-0.1
N.D.
-2.6
-0.0
phage
HSDP5
+0.1
-0.1
N.D.
-2.6
-0.1
phage
T2 MOI10
+0.0
-0.1
N.D.
-2.8
+0.2
phage
K5
+0.2
+0.0
N.D.
-2.7
-0.1
phage
lib only
-0.0
+0.0
N.D.
-2.3
-0.2
phage
K5
+0.2
-0.2
N.D.
-2.7
+0.1
phage
bur MOI1
-0.4
-0.3
N.D.
-1.0
-0.6
phage
LZ4
+0.3
+0.1
N.D.
-2.5
-0.2
phage
mer MOI10
+0.3
-0.1
N.D.
-2.3
-0.2
phage
hib MOI1
+0.1
-0.1
N.D.
-1.9
-0.4
phage
bur MOI10
-0.4
-0.2
N.D.
-1.2
-0.4
phage
N4 MOI10
+0.0
-0.1
N.D.
-2.1
-0.0
phage
lib only
-0.1
-0.0
N.D.
-2.0
-0.0
phage
Sew9
+0.1
+0.0
N.D.
-2.1
-0.1
phage
lib only
-0.1
+0.0
N.D.
-2.2
+0.2
no phage control
Control_HSF
-0.2
-0.0
N.D.
-1.8
-0.0
phage
vio MOI1
-0.3
+0.1
N.D.
-1.9
+0.0
phage
vio MOI10
-0.2
+0.1
N.D.
-2.2
+0.4
phage
lib only
+0.0
-0.1
N.D.
-2.1
+0.2
phage
HSDP5
-0.1
+0.2
N.D.
-2.1
+0.3
phage
iri MOI10
+0.1
+0.0
N.D.
-1.6
-0.2
phage
T5 MOI1
+0.0
-0.0
N.D.
-1.8
+0.2
phage
vio MOI10
+0.0
+0.1
N.D.
-1.7
-0.0
phage
BWC1S MOI10
-1.2
-0.4
N.D.
+0.3
+0.1
phage
T6 MOI1
-0.0
+0.0
N.D.
-1.6
+0.4
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