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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_23715 and OH686_23720 are separated by 64 nucleotides
OH686_23720 and OH686_23725 are separated by 30 nucleotides
OH686_23725 and OH686_23730 are separated by 79 nucleotides
OH686_23730 and OH686_23735 overlap by 11 nucleotides
OH686_23715: OH686_23715 - Protein YciE, at 4,805,097 to 4,805,606
_23715
OH686_23720: OH686_23720 - CDS, at 4,805,671 to 4,805,811
_23720
OH686_23725: OH686_23725 - Manganese catalase , at 4,805,842 to 4,806,720
_23725
OH686_23730: OH686_23730 - hypothetical protein, at 4,806,800 to 4,807,909
_23730
OH686_23735: OH686_23735 - Putative SigmaB asociated two-component system sensor protein, at 4,807,899 to 4,809,662
_23735
Group
Condition
OH686
_23715
OH686
_23720
OH686
_23725
OH686
_23730
OH686
_23735
carbon source
acetate (C)
-0.2
N.D.
-0.1
-0.1
-0.0
carbon source
Sorgoleone (C)
-0.1
N.D.
-0.3
-0.2
+0.1
carbon source
acetate (C)
-0.3
N.D.
-0.1
+0.1
-0.1
carbon source
acetate (C)
-0.2
N.D.
+0.1
+0.1
-0.1
carbon source
octanoate (C)
-0.1
N.D.
-0.1
+0.1
-0.1
carbon source
D-Glucose (C)
-0.1
N.D.
-0.2
+0.1
+0.1
carbon source
Sorgoleone (C)
+0.1
N.D.
+0.1
-0.1
-0.1
carbon source
octanoate (C)
-0.2
N.D.
+0.4
-0.3
+0.0
carbon source
D,L-Malic Acid (C)
-0.1
N.D.
+0.2
-0.0
-0.0
carbon source
acetate (C)
-0.2
N.D.
+0.1
+0.2
-0.0
carbon source
acetate (C)
+0.1
N.D.
+0.3
-0.1
-0.1
carbon source
octanoate (C)
+0.3
N.D.
+0.2
-0.3
-0.1
carbon source
Trisodium citrate (C)
-0.1
N.D.
+0.2
-0.1
+0.2
carbon source
octanoate (C)
-0.0
N.D.
+0.2
+0.2
-0.1
carbon source
Trisodium citrate (C)
-0.1
N.D.
+0.1
+0.1
+0.2
carbon source
Trisodium citrate (C)
-0.1
N.D.
+0.3
+0.0
+0.0
carbon source
D-Glucose (C)
+0.0
N.D.
+0.3
-0.1
+0.1
carbon source
D-Glucose (C)
-0.1
N.D.
+0.2
+0.0
+0.1
carbon source
Trisodium citrate (C)
-0.1
N.D.
+0.2
+0.2
-0.0
carbon source
octanoate (C)
+0.2
N.D.
-0.1
+0.2
+0.0
carbon source
D-Glucose (C)
-0.1
N.D.
+0.3
+0.2
+0.0
carbon source
D-Glucose (C)
+0.2
N.D.
-0.1
+0.2
+0.1
carbon source
acetate (C)
+0.1
N.D.
+0.2
+0.2
-0.1
carbon source
Sorgoleone (C)
+0.2
N.D.
+0.1
+0.1
+0.0
carbon source
D-Glucose (C)
-0.1
N.D.
+0.3
+0.2
+0.1
carbon source
D-Glucose (C)
+0.0
N.D.
+0.1
+0.2
+0.0
carbon source
D-Glucose (C)
+0.0
N.D.
+0.0
+0.2
+0.1
carbon source
Trisodium citrate (C)
+0.3
N.D.
+0.0
+0.2
+0.0
carbon source
octanoate (C)
+0.4
N.D.
+0.1
-0.1
+0.1
carbon source
D-Glucose (C)
+0.4
N.D.
+0.0
+0.2
+0.2
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