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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_23575 and OH686_23580 are separated by 67 nucleotides
OH686_23580 and OH686_23585 are separated by 148 nucleotides
OH686_23585 and OH686_23590 are separated by 269 nucleotides
OH686_23590 and OH686_23595 are separated by 19 nucleotides
OH686_23575: OH686_23575 - putative membrane protein, at 4,779,259 to 4,779,801
_23575
OH686_23580: OH686_23580 - Lipase, at 4,779,869 to 4,780,882
_23580
OH686_23585: OH686_23585 - Isochorismatase family protein, at 4,781,031 to 4,781,717
_23585
OH686_23590: OH686_23590 - RidA/YER057c/UK114 superfamily protein, at 4,781,987 to 4,782,448
_23590
OH686_23595: OH686_23595 - Transcriptional regulator, LysR family, at 4,782,468 to 4,783,454
_23595
Group
Condition
OH686
_23575
OH686
_23580
OH686
_23585
OH686
_23590
OH686
_23595
carbon source
Trisodium citrate (C)
-0.2
-0.1
-0.0
-0.1
-0.1
carbon source
D-Glucose (C)
-0.1
-0.1
-0.0
-0.1
-0.1
carbon source
D-Glucose (C)
-0.1
+0.0
-0.2
-0.0
-0.1
carbon source
Trisodium citrate (C)
-0.2
+0.0
+0.0
-0.2
-0.1
carbon source
D,L-Malic Acid (C)
-0.2
+0.0
+0.0
-0.0
-0.2
carbon source
Trisodium citrate (C)
-0.2
-0.0
-0.0
+0.0
-0.1
carbon source
D,L-Malic Acid (C)
-0.2
-0.0
-0.0
+0.0
-0.1
carbon source
Trisodium citrate (C)
-0.0
+0.0
-0.1
+0.0
-0.2
carbon source
octanoate (C)
-0.2
-0.1
+0.0
+0.1
-0.1
carbon source
acetate (C)
+0.0
+0.0
-0.2
-0.0
-0.1
carbon source
Trisodium citrate (C)
-0.1
+0.1
-0.1
+0.1
-0.1
carbon source
octanoate (C)
-0.2
-0.0
+0.0
+0.1
-0.1
carbon source
Sorgoleone (C)
-0.3
+0.1
-0.1
+0.0
-0.0
carbon source
D-Glucose (C)
+0.1
+0.0
-0.1
-0.2
-0.1
carbon source
acetate (C)
-0.1
+0.1
+0.0
-0.1
-0.1
carbon source
acetate (C)
+0.1
-0.1
+0.0
-0.1
-0.0
carbon source
D,L-Malic Acid (C)
-0.0
+0.1
-0.1
+0.0
-0.1
carbon source
acetate (C)
-0.1
+0.1
-0.0
+0.0
-0.1
carbon source
Sorgoleone (C)
+0.1
+0.1
+0.0
-0.1
-0.2
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.0
+0.1
-0.3
carbon source
D-Glucose (C)
+0.1
+0.2
-0.2
+0.1
-0.2
carbon source
octanoate (C)
+0.1
-0.3
+0.3
-0.1
-0.1
carbon source
D-Glucose (C)
-0.1
+0.2
-0.1
+0.0
-0.0
carbon source
Sorgoleone (C)
+0.0
+0.1
+0.1
-0.1
-0.1
carbon source
D-Glucose (C)
+0.2
-0.1
-0.1
+0.1
-0.0
carbon source
acetate (C)
+0.1
-0.1
-0.0
+0.1
+0.1
carbon source
D-Glucose (C)
-0.1
+0.0
+0.1
+0.2
-0.0
carbon source
octanoate (C)
+0.0
-0.1
+0.3
+0.2
-0.2
carbon source
octanoate (C)
+0.1
+0.1
+0.1
-0.1
+0.1
carbon source
octanoate (C)
+0.3
+0.1
+0.0
-0.2
+0.4
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