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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_22905 and OH686_22910 are separated by 0 nucleotides
OH686_22910 and OH686_22915 are separated by 14 nucleotides
OH686_22915 and OH686_22920 are separated by 127 nucleotides
OH686_22920 and OH686_22925 are separated by 599 nucleotides
OH686_22905: OH686_22905 - hypothetical protein, at 4,642,411 to 4,642,728
_22905
OH686_22910: OH686_22910 - hypothetical protein, at 4,642,729 to 4,642,944
_22910
OH686_22915: OH686_22915 - hypothetical protein, at 4,642,959 to 4,643,834
_22915
OH686_22920: OH686_22920 - DNA recombination protein RmuC, at 4,643,962 to 4,645,548
_22920
OH686_22925: OH686_22925 - RNA polymerase sigma factor RpoD, at 4,646,148 to 4,648,556
_22925
Group
Condition
OH686
_22905
OH686
_22910
OH686
_22915
OH686
_22920
OH686
_22925
carbon source
octanoate (C)
-0.5
+0.0
-0.4
-0.4
-0.1
carbon source
acetate (C)
-0.2
-0.1
-0.2
-0.1
-0.1
carbon source
D-Glucose (C)
-0.0
-0.1
-0.2
-0.2
+0.1
carbon source
acetate (C)
-0.1
-0.1
-0.2
-0.1
+0.1
carbon source
octanoate (C)
-0.3
+0.1
-0.1
-0.1
+0.1
carbon source
D-Glucose (C)
+0.1
-0.1
-0.1
-0.2
+0.0
carbon source
octanoate (C)
-0.3
-0.1
-0.1
-0.0
+0.2
carbon source
Trisodium citrate (C)
-0.3
+0.1
-0.1
-0.0
-0.0
carbon source
octanoate (C)
+0.1
-0.1
-0.3
+0.1
-0.1
carbon source
Sorgoleone (C)
-0.0
-0.0
+0.0
-0.3
+0.1
carbon source
D-Glucose (C)
+0.1
-0.1
-0.2
-0.2
+0.1
carbon source
Sorgoleone (C)
+0.1
+0.0
+0.0
-0.4
+0.1
carbon source
Sorgoleone (C)
+0.1
-0.2
+0.0
-0.3
+0.1
carbon source
Sorgoleone (C)
+0.0
-0.1
+0.0
-0.3
+0.2
carbon source
D-Glucose (C)
-0.1
-0.0
-0.2
-0.1
+0.2
carbon source
octanoate (C)
+0.2
-0.1
-0.2
+0.1
-0.1
carbon source
Trisodium citrate (C)
-0.1
+0.1
-0.1
-0.2
+0.1
carbon source
Trisodium citrate (C)
+0.2
-0.1
-0.1
-0.0
-0.1
carbon source
D-Glucose (C)
-0.1
+0.1
-0.1
-0.1
+0.1
carbon source
D-Glucose (C)
-0.1
+0.0
-0.1
-0.1
+0.2
carbon source
Trisodium citrate (C)
+0.1
+0.0
-0.1
-0.2
-0.0
carbon source
D,L-Malic Acid (C)
+0.1
+0.1
-0.1
-0.1
+0.0
carbon source
D-Glucose (C)
+0.3
-0.0
-0.2
-0.2
+0.1
carbon source
acetate (C)
+0.1
+0.0
-0.1
-0.2
+0.1
carbon source
acetate (C)
+0.2
+0.0
-0.1
-0.0
+0.1
carbon source
Trisodium citrate (C)
+0.3
+0.0
-0.2
+0.0
-0.0
carbon source
D-Glucose (C)
+0.3
+0.1
-0.2
-0.2
+0.2
carbon source
D-Glucose (C)
+0.3
-0.1
-0.0
-0.1
+0.0
carbon source
D-Glucose (C)
+0.4
+0.0
-0.1
-0.1
+0.1
carbon source
octanoate (C)
+0.4
+0.1
-0.2
-0.1
+0.2
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