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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_22455 and OH686_22460 are separated by 94 nucleotides
OH686_22460 and OH686_22465 are separated by 98 nucleotides
OH686_22465 and OH686_22470 are separated by 29 nucleotides
OH686_22470 and OH686_22475 overlap by 4 nucleotides
OH686_22455: OH686_22455 - Transcriptional regulator, LysR family, at 4,563,847 to 4,564,701
_22455
OH686_22460: OH686_22460 - hypothetical protein, at 4,564,796 to 4,565,032
_22460
OH686_22465: OH686_22465 - hypothetical protein, at 4,565,131 to 4,565,589
_22465
OH686_22470: OH686_22470 - hypothetical protein, at 4,565,619 to 4,566,812
_22470
OH686_22475: OH686_22475 - hypothetical protein, at 4,566,809 to 4,567,207
_22475
Group
Condition
OH686
_22455
OH686
_22460
OH686
_22465
OH686
_22470
OH686
_22475
carbon source
octanoate (C)
+0.2
-2.2
+0.0
-0.0
-0.1
carbon source
octanoate (C)
-0.3
-0.5
-0.2
-0.1
+0.0
carbon source
octanoate (C)
+0.1
-1.0
+0.3
-0.0
-0.3
carbon source
acetate (C)
-0.1
-0.9
+0.1
+0.1
-0.1
carbon source
Trisodium citrate (C)
+0.1
-0.4
+0.0
-0.2
-0.3
carbon source
D-Glucose (C)
-0.0
-0.4
+0.1
+0.0
-0.3
carbon source
Trisodium citrate (C)
+0.0
-0.7
+0.2
+0.0
-0.2
carbon source
acetate (C)
+0.1
-0.5
+0.1
-0.1
-0.0
carbon source
Trisodium citrate (C)
-0.1
-0.2
+0.1
+0.0
-0.2
carbon source
D-Glucose (C)
+0.1
-0.4
+0.0
+0.0
-0.0
carbon source
D-Glucose (C)
+0.0
-0.4
+0.1
+0.1
-0.2
carbon source
D-Glucose (C)
+0.1
-0.1
+0.1
-0.1
-0.3
carbon source
D,L-Malic Acid (C)
-0.2
-0.3
+0.1
-0.1
+0.1
carbon source
octanoate (C)
-0.3
-0.1
+0.3
-0.1
+0.0
carbon source
Trisodium citrate (C)
+0.0
-0.4
+0.1
+0.1
+0.0
carbon source
octanoate (C)
+0.1
+0.1
+0.2
-0.1
-0.4
carbon source
Trisodium citrate (C)
-0.1
-0.1
+0.2
+0.1
-0.1
carbon source
D-Glucose (C)
+0.0
-0.3
+0.3
-0.0
-0.0
carbon source
D-Glucose (C)
-0.1
+0.1
+0.2
-0.0
-0.1
carbon source
acetate (C)
+0.1
-0.3
+0.1
+0.0
+0.1
carbon source
D-Glucose (C)
+0.2
-0.1
+0.2
-0.0
-0.0
carbon source
D-Glucose (C)
+0.2
+0.3
+0.0
-0.1
-0.2
carbon source
D-Glucose (C)
-0.1
+0.3
+0.1
-0.1
+0.0
carbon source
Sorgoleone (C)
+0.1
+0.4
+0.1
-0.1
-0.1
carbon source
D,L-Malic Acid (C)
+0.0
+0.4
+0.1
+0.0
-0.1
carbon source
D-Glucose (C)
+0.1
+0.4
+0.1
+0.0
-0.1
carbon source
D-Glucose (C)
+0.0
+0.6
+0.2
-0.2
-0.2
carbon source
Sorgoleone (C)
+0.2
+0.2
+0.1
-0.0
+0.1
carbon source
D,L-Malic Acid (C)
-0.1
+0.5
+0.2
+0.0
-0.1
carbon source
octanoate (C)
+0.4
+0.0
+0.2
+0.1
-0.1
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