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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_22420 and OH686_22425 are separated by 44 nucleotides
OH686_22425 and OH686_22430 are separated by 100 nucleotides
OH686_22430 and OH686_22435 are separated by 0 nucleotides
OH686_22435 and OH686_22440 are separated by 52 nucleotides
OH686_22420: OH686_22420 - hypothetical protein, at 4,558,027 to 4,558,272
_22420
OH686_22425: OH686_22425 - Intracellular protease, at 4,558,317 to 4,559,159
_22425
OH686_22430: OH686_22430 - Transcriptional regulator, LysR family, at 4,559,260 to 4,560,186
_22430
OH686_22435: OH686_22435 - conserved hypothetical protein, family, at 4,560,187 to 4,561,344
_22435
OH686_22440: OH686_22440 - Translation elongation factor P, at 4,561,397 to 4,561,954
_22440
Group
Condition
OH686
_22420
OH686
_22425
OH686
_22430
OH686
_22435
OH686
_22440
carbon source
octanoate (C)
N.D.
-0.2
-0.8
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
-0.1
-0.1
N.D.
N.D.
carbon source
Sorgoleone (C)
N.D.
-0.2
-0.0
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
-0.1
-0.1
N.D.
N.D.
carbon source
acetate (C)
N.D.
-0.1
-0.1
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
-0.0
-0.1
N.D.
N.D.
carbon source
octanoate (C)
N.D.
-0.1
+0.0
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
N.D.
-0.1
+0.0
N.D.
N.D.
carbon source
octanoate (C)
N.D.
+0.0
-0.1
N.D.
N.D.
carbon source
octanoate (C)
N.D.
-0.1
+0.1
N.D.
N.D.
carbon source
octanoate (C)
N.D.
-0.1
+0.1
N.D.
N.D.
carbon source
acetate (C)
N.D.
-0.1
+0.0
N.D.
N.D.
carbon source
acetate (C)
N.D.
+0.1
-0.1
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
N.D.
+0.1
-0.1
N.D.
N.D.
carbon source
Trisodium citrate (C)
N.D.
-0.1
+0.1
N.D.
N.D.
carbon source
Trisodium citrate (C)
N.D.
-0.0
+0.1
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
-0.0
+0.1
N.D.
N.D.
carbon source
Trisodium citrate (C)
N.D.
-0.0
+0.1
N.D.
N.D.
carbon source
acetate (C)
N.D.
-0.0
+0.1
N.D.
N.D.
carbon source
Trisodium citrate (C)
N.D.
-0.0
+0.1
N.D.
N.D.
carbon source
Trisodium citrate (C)
N.D.
+0.0
+0.1
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
-0.0
+0.1
N.D.
N.D.
carbon source
acetate (C)
N.D.
+0.0
+0.1
N.D.
N.D.
carbon source
Sorgoleone (C)
N.D.
+0.1
+0.1
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
+0.1
+0.1
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
+0.0
+0.1
N.D.
N.D.
carbon source
Sorgoleone (C)
N.D.
-0.0
+0.2
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
+0.1
+0.1
N.D.
N.D.
carbon source
acetate (C)
N.D.
+0.1
+0.1
N.D.
N.D.
carbon source
octanoate (C)
N.D.
-0.0
+0.3
N.D.
N.D.
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