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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_22400 and OH686_22405 are separated by 114 nucleotides
OH686_22405 and OH686_22410 are separated by 123 nucleotides
OH686_22410 and OH686_22415 are separated by 99 nucleotides
OH686_22415 and OH686_22420 are separated by 61 nucleotides
OH686_22400: OH686_22400 - tRNA-Ser, at 4,555,473 to 4,555,562
_22400
OH686_22405: OH686_22405 - hypothetical protein, at 4,555,677 to 4,555,892
_22405
OH686_22410: OH686_22410 - Transcriptional regulator, LysR family, at 4,556,016 to 4,556,900
_22410
OH686_22415: OH686_22415 - Permease of the drug/metabolite transporter (DMT) superfamily, at 4,557,000 to 4,557,965
_22415
OH686_22420: OH686_22420 - hypothetical protein, at 4,558,027 to 4,558,272
_22420
Group
Condition
OH686
_22400
OH686
_22405
OH686
_22410
OH686
_22415
OH686
_22420
carbon source
D-Glucose (C)
N.D.
-1.4
+0.1
-0.1
N.D.
carbon source
acetate (C)
N.D.
-0.5
-0.2
-0.0
N.D.
carbon source
Trisodium citrate (C)
N.D.
-0.6
-0.1
-0.1
N.D.
carbon source
D-Glucose (C)
N.D.
-0.6
-0.2
+0.2
N.D.
carbon source
Trisodium citrate (C)
N.D.
-0.3
-0.3
+0.0
N.D.
carbon source
octanoate (C)
N.D.
-0.1
-0.2
-0.2
N.D.
carbon source
acetate (C)
N.D.
-0.5
-0.0
+0.0
N.D.
carbon source
D-Glucose (C)
N.D.
-0.3
-0.2
-0.0
N.D.
carbon source
Trisodium citrate (C)
N.D.
-0.4
-0.0
-0.0
N.D.
carbon source
D-Glucose (C)
N.D.
-0.3
-0.1
-0.0
N.D.
carbon source
Sorgoleone (C)
N.D.
-0.3
-0.1
-0.0
N.D.
carbon source
D-Glucose (C)
N.D.
-0.3
-0.1
+0.0
N.D.
carbon source
acetate (C)
N.D.
-0.3
-0.0
-0.0
N.D.
carbon source
acetate (C)
N.D.
-0.2
-0.1
+0.0
N.D.
carbon source
D-Glucose (C)
N.D.
-0.3
-0.0
+0.0
N.D.
carbon source
octanoate (C)
N.D.
+0.2
-0.2
-0.1
N.D.
carbon source
D-Glucose (C)
N.D.
+0.1
-0.3
+0.0
N.D.
carbon source
acetate (C)
N.D.
-0.1
+0.1
-0.0
N.D.
carbon source
octanoate (C)
N.D.
+0.3
-0.0
-0.2
N.D.
carbon source
D,L-Malic Acid (C)
N.D.
+0.2
-0.1
-0.0
N.D.
carbon source
octanoate (C)
N.D.
+0.5
-0.3
-0.1
N.D.
carbon source
D-Glucose (C)
N.D.
+0.3
-0.1
-0.1
N.D.
carbon source
D-Glucose (C)
N.D.
+0.2
-0.1
+0.0
N.D.
carbon source
Trisodium citrate (C)
N.D.
+0.2
+0.0
-0.0
N.D.
carbon source
octanoate (C)
N.D.
+0.0
+0.3
-0.1
N.D.
carbon source
D,L-Malic Acid (C)
N.D.
+0.3
-0.0
-0.0
N.D.
carbon source
octanoate (C)
N.D.
+0.2
+0.0
+0.1
N.D.
carbon source
D-Glucose (C)
N.D.
+0.4
+0.0
-0.1
N.D.
carbon source
acetate (C)
N.D.
+0.3
-0.0
+0.0
N.D.
carbon source
Sorgoleone (C)
N.D.
+0.4
-0.0
+0.1
N.D.
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