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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_22300 and OH686_22305 are separated by 78 nucleotides
OH686_22305 and OH686_22310 are separated by 26 nucleotides
OH686_22310 and OH686_22315 are separated by 359 nucleotides
OH686_22315 and OH686_22320 are separated by 655 nucleotides
OH686_22300: OH686_22300 - Transcriptional regulator, AcrR family, at 4,540,513 to 4,541,160
_22300
OH686_22305: OH686_22305 - hypothetical protein, at 4,541,239 to 4,541,640
_22305
OH686_22310: OH686_22310 - hypothetical protein, at 4,541,667 to 4,541,825
_22310
OH686_22315: OH686_22315 - hypothetical protein, at 4,542,185 to 4,542,493
_22315
OH686_22320: OH686_22320 - hypothetical protein' product='hypothetical protein, at 4,543,149 to 4,543,592
_22320
Group
Condition
OH686
_22300
OH686
_22305
OH686
_22310
OH686
_22315
OH686
_22320
carbon source
octanoate (C)
+0.1
-0.0
-0.6
-0.1
-0.6
carbon source
Sorgoleone (C)
+0.0
-0.1
-0.2
-0.0
-0.2
carbon source
Trisodium citrate (C)
+0.1
-0.1
-0.2
-0.3
+0.1
carbon source
D-Glucose (C)
-0.1
-0.1
-0.2
+0.1
-0.0
carbon source
Sorgoleone (C)
+0.0
+0.1
-0.4
+0.1
-0.1
carbon source
D,L-Malic Acid (C)
+0.1
-0.0
-0.4
-0.0
-0.0
carbon source
D-Glucose (C)
-0.1
-0.0
-0.4
+0.2
+0.1
carbon source
acetate (C)
+0.1
+0.0
-0.2
+0.1
-0.2
carbon source
D-Glucose (C)
+0.0
-0.1
-0.2
-0.0
+0.1
carbon source
D-Glucose (C)
-0.0
+0.1
-0.2
-0.1
+0.1
carbon source
octanoate (C)
+0.0
-0.2
-0.3
+0.0
+0.3
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.2
-0.2
+0.2
carbon source
Sorgoleone (C)
+0.0
+0.1
-0.3
+0.0
+0.1
carbon source
D,L-Malic Acid (C)
-0.2
+0.1
-0.1
-0.0
+0.2
carbon source
D-Glucose (C)
+0.0
-0.1
-0.1
-0.1
+0.3
carbon source
octanoate (C)
-0.1
+0.1
-0.3
-0.0
+0.3
carbon source
D,L-Malic Acid (C)
+0.0
+0.2
-0.2
+0.0
+0.0
carbon source
acetate (C)
-0.1
+0.2
-0.1
+0.0
+0.1
carbon source
acetate (C)
-0.1
+0.1
-0.1
-0.1
+0.3
carbon source
Trisodium citrate (C)
-0.1
+0.0
-0.2
+0.2
+0.2
carbon source
octanoate (C)
-0.1
+0.0
-0.3
-0.1
+0.6
carbon source
acetate (C)
+0.0
+0.1
-0.2
+0.1
+0.2
carbon source
D-Glucose (C)
-0.1
-0.0
-0.1
+0.2
+0.2
carbon source
D-Glucose (C)
+0.1
-0.1
-0.2
+0.1
+0.3
carbon source
Trisodium citrate (C)
-0.2
+0.1
+0.1
+0.3
-0.1
carbon source
D-Glucose (C)
+0.1
+0.2
-0.3
+0.3
+0.2
carbon source
octanoate (C)
+0.1
-0.1
+0.1
+0.2
+0.2
carbon source
acetate (C)
+0.0
+0.1
+0.1
+0.1
+0.2
carbon source
D-Glucose (C)
-0.1
+0.3
+0.1
+0.2
+0.2
carbon source
octanoate (C)
+0.1
+0.1
-0.2
+0.1
+0.6
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