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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_22270 and OH686_22275 are separated by 47 nucleotides
OH686_22275 and OH686_22280 are separated by 78 nucleotides
OH686_22280 and OH686_22285 are separated by 2 nucleotides
OH686_22285 and OH686_22290 overlap by 4 nucleotides
OH686_22270: OH686_22270 - Glutamine amidotransferase, class I, at 4,534,984 to 4,535,706
_22270
OH686_22275: OH686_22275 - CDS, at 4,535,754 to 4,535,978
_22275
OH686_22280: OH686_22280 - Protein containing domains DUF404, DUF407, at 4,536,057 to 4,537,466
_22280
OH686_22285: OH686_22285 - Protein containing domains DUF403, at 4,537,469 to 4,538,419
_22285
OH686_22290: OH686_22290 - putative cysteine protease, at 4,538,416 to 4,539,219
_22290
Group
Condition
OH686
_22270
OH686
_22275
OH686
_22280
OH686
_22285
OH686
_22290
carbon source
octanoate (C)
-0.8
-0.2
-0.0
+0.0
+0.2
carbon source
D-Glucose (C)
-0.2
-0.1
-0.1
+0.0
+0.0
carbon source
acetate (C)
+0.1
-0.1
-0.0
-0.1
-0.2
carbon source
D-Glucose (C)
+0.1
-0.4
-0.0
+0.0
+0.2
carbon source
D-Glucose (C)
+0.1
+0.1
-0.0
-0.2
-0.1
carbon source
octanoate (C)
-0.9
+0.0
+0.6
-0.1
+0.3
carbon source
acetate (C)
-0.1
+0.3
+0.1
-0.1
-0.1
carbon source
D-Glucose (C)
-0.1
-0.3
-0.0
+0.2
+0.1
carbon source
octanoate (C)
+0.3
+0.2
-0.2
-0.2
-0.1
carbon source
D-Glucose (C)
-0.2
+0.1
+0.0
-0.1
+0.2
carbon source
D-Glucose (C)
+0.3
+0.1
+0.0
+0.0
-0.2
carbon source
acetate (C)
+0.2
+0.1
-0.0
-0.1
+0.1
carbon source
Sorgoleone (C)
+0.3
-0.1
-0.0
-0.0
+0.1
carbon source
Trisodium citrate (C)
-0.2
+0.2
+0.1
+0.0
+0.1
carbon source
D-Glucose (C)
+0.2
-0.1
+0.1
+0.0
+0.1
carbon source
Trisodium citrate (C)
-0.1
+0.1
+0.1
+0.1
+0.1
carbon source
D-Glucose (C)
+0.1
+0.1
-0.1
-0.1
+0.2
carbon source
Trisodium citrate (C)
+0.0
+0.1
+0.1
-0.1
+0.1
carbon source
D,L-Malic Acid (C)
+0.0
+0.2
+0.1
+0.1
-0.0
carbon source
octanoate (C)
+0.0
+0.5
-0.0
+0.0
-0.1
carbon source
D,L-Malic Acid (C)
-0.1
+0.3
+0.2
+0.1
+0.0
carbon source
Sorgoleone (C)
+0.2
+0.1
+0.0
+0.0
+0.2
carbon source
acetate (C)
-0.0
+0.3
+0.1
+0.0
+0.2
carbon source
D,L-Malic Acid (C)
-0.1
+0.4
+0.1
+0.1
+0.1
carbon source
Trisodium citrate (C)
-0.0
+0.4
+0.3
-0.0
+0.1
carbon source
Trisodium citrate (C)
-0.0
+0.6
+0.2
-0.1
+0.1
carbon source
Trisodium citrate (C)
+0.1
+0.4
+0.1
-0.1
+0.1
carbon source
octanoate (C)
-0.6
+0.9
+0.4
-0.1
+0.2
carbon source
Trisodium citrate (C)
+0.4
+0.3
+0.2
-0.0
+0.0
carbon source
octanoate (C)
+0.4
+0.6
-0.1
+0.2
-0.1
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