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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_21120 and OH686_21125 are separated by 76 nucleotides
OH686_21125 and OH686_21130 are separated by 147 nucleotides
OH686_21130 and OH686_21135 are separated by 74 nucleotides
OH686_21135 and OH686_21140 are separated by 61 nucleotides
OH686_21120: OH686_21120 - Indolepyruvate ferredoxin oxidoreductase subunit, at 4,323,167 to 4,326,634
_21120
OH686_21125: OH686_21125 - Branched-chain amino acid dehydrogenase [deaminating] , at 4,326,711 to 4,327,763
_21125
OH686_21130: OH686_21130 - Aromatic amino acid transport protein AroP, at 4,327,911 to 4,329,341
_21130
OH686_21135: OH686_21135 - Methyl-accepting chemotaxis sensor/transducer protein, at 4,329,416 to 4,331,023
_21135
OH686_21140: OH686_21140 - Membrane-bound metal-dependent hydrolase, at 4,331,085 to 4,332,128
_21140
Group
Condition
OH686
_21120
OH686
_21125
OH686
_21130
OH686
_21135
OH686
_21140
carbon source
octanoate (C)
-2.7
-0.3
+0.2
+0.1
-0.2
carbon source
octanoate (C)
-2.8
-0.1
+0.1
+0.1
-0.3
carbon source
octanoate (C)
-2.1
-0.6
+0.0
+0.3
-0.0
carbon source
octanoate (C)
-2.0
-0.2
+0.1
-0.0
-0.2
carbon source
octanoate (C)
-2.0
-0.1
+0.3
+0.3
-0.1
carbon source
octanoate (C)
-1.8
+0.1
+0.2
+0.1
-0.0
carbon source
acetate (C)
-0.8
-0.1
-0.0
-0.1
-0.0
carbon source
acetate (C)
-0.8
+0.1
-0.1
-0.1
+0.0
carbon source
acetate (C)
-0.7
-0.0
+0.0
+0.0
-0.1
carbon source
acetate (C)
-0.6
-0.1
-0.0
-0.0
+0.2
carbon source
acetate (C)
-0.4
-0.0
-0.1
-0.0
+0.0
carbon source
acetate (C)
-0.5
-0.0
+0.0
+0.0
-0.0
carbon source
acetate (C)
-0.5
+0.1
+0.0
-0.1
+0.1
carbon source
acetate (C)
-0.4
+0.1
-0.0
+0.1
+0.0
carbon source
Trisodium citrate (C)
+0.3
-0.1
-0.1
-0.1
-0.1
carbon source
D-Glucose (C)
+0.2
-0.1
-0.1
+0.1
-0.1
carbon source
D-Glucose (C)
+0.3
+0.1
-0.1
-0.2
+0.1
carbon source
Trisodium citrate (C)
+0.5
-0.1
-0.0
-0.1
-0.0
carbon source
Trisodium citrate (C)
+0.3
+0.1
-0.0
-0.1
+0.1
carbon source
D-Glucose (C)
+0.3
-0.0
-0.0
+0.1
+0.0
carbon source
Trisodium citrate (C)
+0.4
-0.1
-0.0
-0.1
+0.1
carbon source
D-Glucose (C)
+0.2
-0.1
+0.0
+0.0
+0.1
carbon source
Trisodium citrate (C)
+0.3
-0.0
-0.0
+0.1
+0.1
carbon source
D-Glucose (C)
+0.4
+0.1
-0.0
-0.1
+0.0
carbon source
Trisodium citrate (C)
+0.4
-0.1
-0.1
+0.1
+0.2
carbon source
D-Glucose (C)
+0.4
+0.1
-0.1
+0.0
+0.1
carbon source
D-Glucose (C)
+1.3
+0.3
+0.0
-0.1
-0.1
carbon source
D-Glucose (C)
+1.3
+0.2
-0.0
+0.1
-0.1
carbon source
D-Glucose (C)
+1.4
+0.2
+0.2
-0.1
-0.1
carbon source
D-Glucose (C)
+1.3
+0.4
+0.1
+0.1
+0.1
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