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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_21070 and OH686_21075 are separated by 142 nucleotides
OH686_21075 and OH686_21080 are separated by 222 nucleotides
OH686_21080 and OH686_21085 are separated by 4 nucleotides
OH686_21085 and OH686_21090 are separated by 154 nucleotides
OH686_21070: OH686_21070 - Hemolysin-type calcium-binding region, at 4,311,561 to 4,313,072
_21070
OH686_21075: OH686_21075 - Sensory box/GGDEF family protein, at 4,313,215 to 4,315,659
_21075
OH686_21080: OH686_21080 - 4-hydroxyphenylpyruvate dioxygenase, at 4,315,882 to 4,316,964
_21080
OH686_21085: OH686_21085 - Homogentisate 1,2-dioxygenase , at 4,316,969 to 4,318,108
_21085
OH686_21090: OH686_21090 - Fumarylacetoacetase , at 4,318,263 to 4,319,246
_21090
Group
Condition
OH686
_21070
OH686
_21075
OH686
_21080
OH686
_21085
OH686
_21090
carbon source
octanoate (C)
-0.1
-0.0
-0.8
-0.6
N.D.
carbon source
octanoate (C)
-0.1
-0.0
-0.7
-0.3
N.D.
carbon source
octanoate (C)
+0.4
-0.3
-0.4
-0.6
N.D.
carbon source
octanoate (C)
+0.1
+0.0
-0.6
+0.0
N.D.
carbon source
octanoate (C)
+0.3
+0.0
-0.7
-0.0
N.D.
carbon source
acetate (C)
-0.0
+0.0
-0.1
-0.2
N.D.
carbon source
Trisodium citrate (C)
-0.1
-0.0
+0.0
-0.2
N.D.
carbon source
D-Glucose (C)
-0.1
-0.1
+0.0
-0.1
N.D.
carbon source
Trisodium citrate (C)
+0.1
-0.1
-0.2
+0.0
N.D.
carbon source
octanoate (C)
+0.2
+0.1
-0.3
-0.2
N.D.
carbon source
Sorgoleone (C)
+0.0
-0.0
-0.2
+0.1
N.D.
carbon source
Sorgoleone (C)
-0.1
-0.1
+0.0
+0.1
N.D.
carbon source
acetate (C)
+0.1
+0.0
-0.1
-0.1
N.D.
carbon source
Trisodium citrate (C)
+0.0
-0.0
-0.1
+0.1
N.D.
carbon source
D-Glucose (C)
+0.1
-0.1
+0.1
-0.0
N.D.
carbon source
D-Glucose (C)
+0.0
+0.0
+0.1
-0.1
N.D.
carbon source
Trisodium citrate (C)
+0.1
+0.1
-0.1
-0.0
N.D.
carbon source
acetate (C)
+0.0
+0.0
-0.1
+0.2
N.D.
carbon source
Trisodium citrate (C)
+0.1
+0.0
-0.2
+0.2
N.D.
carbon source
acetate (C)
-0.1
-0.0
+0.1
+0.2
N.D.
carbon source
Sorgoleone (C)
-0.0
+0.0
+0.0
+0.2
N.D.
carbon source
Trisodium citrate (C)
-0.0
-0.1
+0.1
+0.3
N.D.
carbon source
D-Glucose (C)
-0.1
-0.1
+0.2
+0.2
N.D.
carbon source
D-Glucose (C)
-0.1
-0.0
+0.3
+0.2
N.D.
carbon source
D-Glucose (C)
+0.1
+0.1
+0.1
+0.1
N.D.
carbon source
D,L-Malic Acid (C)
+0.2
-0.0
+0.2
+0.0
N.D.
carbon source
D-Glucose (C)
-0.1
-0.0
+0.9
+0.5
N.D.
carbon source
D-Glucose (C)
-0.1
+0.1
+1.0
+0.2
N.D.
carbon source
D-Glucose (C)
-0.0
+0.1
+0.7
+0.5
N.D.
carbon source
D-Glucose (C)
+0.0
+0.2
+0.9
+0.4
N.D.
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