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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_20625 and OH686_20630 are separated by 60 nucleotides
OH686_20630 and OH686_20635 are separated by 537 nucleotides
OH686_20635 and OH686_20640 are separated by 6 nucleotides
OH686_20640 and OH686_20645 are separated by 120 nucleotides
OH686_20625: OH686_20625 - Type I secretion system ATPase, at 4,208,904 to 4,211,060
_20625
OH686_20630: OH686_20630 - Type I secretion outer membrane protein, TolC family or Type I secretion system, outer membrane component LapE, at 4,211,121 to 4,212,476
_20630
OH686_20635: OH686_20635 - hypothetical protein' product='hypothetical protein, at 4,213,014 to 4,213,349
_20635
OH686_20640: OH686_20640 - hypothetical protein, at 4,213,356 to 4,223,963
_20640
OH686_20645: OH686_20645 - Tryptophan synthase beta chain like , at 4,224,084 to 4,224,425
_20645
Group
Condition
OH686
_20625
OH686
_20630
OH686
_20635
OH686
_20640
OH686
_20645
carbon source
D-Glucose (C)
-0.1
-0.1
-0.4
-0.2
-0.3
carbon source
octanoate (C)
+0.0
-0.1
+0.2
+0.0
-0.7
carbon source
Trisodium citrate (C)
+0.0
+0.1
+0.0
-0.0
-0.4
carbon source
octanoate (C)
+0.2
+0.0
-0.2
-0.1
-0.2
carbon source
octanoate (C)
-0.2
+0.0
-0.1
+0.0
-0.1
carbon source
octanoate (C)
-0.2
+0.1
-0.0
+0.0
-0.2
carbon source
octanoate (C)
+0.1
+0.1
+0.2
-0.0
-0.5
carbon source
Trisodium citrate (C)
+0.0
+0.0
-0.3
-0.0
+0.2
carbon source
D-Glucose (C)
+0.1
-0.1
-0.1
-0.1
+0.2
carbon source
D,L-Malic Acid (C)
+0.0
+0.1
+0.1
+0.0
-0.2
carbon source
acetate (C)
-0.0
-0.0
-0.2
-0.0
+0.3
carbon source
acetate (C)
+0.0
+0.1
-0.2
+0.0
+0.2
carbon source
D-Glucose (C)
+0.1
+0.1
-0.2
+0.0
+0.2
carbon source
Sorgoleone (C)
+0.1
+0.1
+0.2
-0.0
-0.1
carbon source
Trisodium citrate (C)
-0.1
+0.0
+0.1
-0.0
+0.2
carbon source
D,L-Malic Acid (C)
+0.1
+0.1
+0.1
+0.1
-0.1
carbon source
Trisodium citrate (C)
-0.0
+0.1
-0.2
-0.0
+0.6
carbon source
acetate (C)
+0.2
+0.1
-0.0
+0.1
-0.0
carbon source
octanoate (C)
+0.1
+0.1
+0.1
-0.0
+0.2
carbon source
Trisodium citrate (C)
+0.1
+0.1
-0.1
-0.0
+0.3
carbon source
acetate (C)
+0.1
+0.1
+0.1
-0.0
+0.3
carbon source
acetate (C)
+0.3
+0.2
+0.2
+0.2
-0.3
carbon source
D-Glucose (C)
+0.1
+0.0
+0.1
+0.0
+0.3
carbon source
D-Glucose (C)
+0.1
+0.0
+0.1
-0.0
+0.4
carbon source
D,L-Malic Acid (C)
+0.3
+0.2
+0.3
+0.2
-0.4
carbon source
D-Glucose (C)
+0.1
+0.2
+0.0
+0.1
+0.2
carbon source
D-Glucose (C)
+0.0
+0.1
+0.2
-0.0
+0.4
carbon source
D-Glucose (C)
+0.2
+0.1
+0.2
+0.1
+0.2
carbon source
D-Glucose (C)
+0.1
+0.1
+0.2
+0.1
+0.3
carbon source
acetate (C)
+0.2
+0.2
+0.1
+0.2
+0.3
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