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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_20385 and OH686_20390 are separated by 81 nucleotides
OH686_20390 and OH686_20395 are separated by 349 nucleotides
OH686_20395 and OH686_20400 are separated by 103 nucleotides
OH686_20400 and OH686_20405 overlap by 4 nucleotides
OH686_20385: OH686_20385 - hypothetical protein, at 4,163,357 to 4,163,791
_20385
OH686_20390: OH686_20390 - hypothetical protein, at 4,163,873 to 4,165,123
_20390
OH686_20395: OH686_20395 - Phenazine biosynthesis protein PhzF like, at 4,165,473 to 4,166,252
_20395
OH686_20400: OH686_20400 - Ferric iron ABC transporter, ATP-binding protein, at 4,166,356 to 4,167,459
_20400
OH686_20405: OH686_20405 - ornithine carbamoyltransferase, at 4,167,456 to 4,168,376
_20405
Group
Condition
OH686
_20385
OH686
_20390
OH686
_20395
OH686
_20400
OH686
_20405
carbon source
octanoate (C)
-0.2
+0.0
-0.1
-0.4
-4.5
carbon source
Trisodium citrate (C)
-0.1
-0.0
-0.3
-0.4
-4.4
carbon source
Trisodium citrate (C)
-0.1
-0.1
-0.3
-0.4
-4.2
carbon source
Trisodium citrate (C)
-0.1
+0.1
-0.1
-0.4
-4.6
carbon source
Trisodium citrate (C)
-0.1
-0.1
-0.2
-0.4
-4.2
carbon source
octanoate (C)
-0.0
-0.0
-0.1
-0.9
-3.8
carbon source
Trisodium citrate (C)
+0.2
-0.1
-0.0
-0.3
-4.5
carbon source
D-Glucose (C)
-0.6
-0.1
-0.2
-0.4
-3.4
carbon source
Trisodium citrate (C)
+0.0
+0.0
-0.2
-0.4
-4.1
carbon source
D-Glucose (C)
-0.2
-0.1
-0.2
-0.4
-3.6
carbon source
Trisodium citrate (C)
-0.0
+0.0
+0.1
-0.4
-4.3
carbon source
octanoate (C)
-0.4
-0.0
+0.1
-0.5
-3.7
carbon source
D-Glucose (C)
+0.1
-0.1
-0.3
-0.6
-3.5
carbon source
octanoate (C)
-0.0
+0.1
+0.0
-0.4
-4.0
carbon source
Trisodium citrate (C)
+0.0
-0.0
+0.0
-0.4
-3.9
carbon source
D-Glucose (C)
-0.2
-0.2
+0.1
-0.3
-3.6
carbon source
D-Glucose (C)
+0.0
+0.0
-0.2
-0.4
-3.6
carbon source
D-Glucose (C)
-0.2
-0.1
-0.1
-0.4
-3.1
carbon source
acetate (C)
-0.0
+0.1
-0.0
-0.1
-3.8
carbon source
D,L-Malic Acid (C)
-0.1
-0.0
-0.0
-0.4
-3.1
carbon source
D-Glucose (C)
-0.3
-0.0
-0.1
-0.4
-2.7
carbon source
D-Glucose (C)
+0.1
-0.0
-0.2
-0.2
-3.1
carbon source
D-Glucose (C)
+0.0
+0.0
-0.1
-0.5
-2.7
carbon source
octanoate (C)
-0.3
+0.1
-0.9
-0.4
-1.6
carbon source
D-Glucose (C)
+0.0
+0.1
-0.1
-0.3
-2.8
carbon source
D-Glucose (C)
-0.1
+0.0
-0.1
-0.7
-2.3
carbon source
D-Glucose (C)
-0.0
+0.1
-0.2
-0.5
-2.4
carbon source
D,L-Malic Acid (C)
+0.1
-0.0
-0.2
-0.4
-2.5
carbon source
D,L-Malic Acid (C)
+0.1
-0.0
+0.1
-0.3
-2.7
carbon source
octanoate (C)
+0.1
+0.1
-0.0
-0.5
-2.4
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