Fitness for 5 genes in Pseudomonas sp. S08-1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 41 experiments or choose conditions or try the comparative fitness browser

500 ntOH686_20035 and OH686_20040 overlap by 32 nucleotidesOH686_20040 and OH686_20045 are separated by 345 nucleotidesOH686_20045 and OH686_20050 are separated by 37 nucleotidesOH686_20050 and OH686_20055 are separated by 8 nucleotides OH686_20035: OH686_20035 - hypothetical protein, at 4,098,698 to 4,099,150 _20035 OH686_20040: OH686_20040 - L-aspartate oxidase, at 4,099,119 to 4,100,735 _20040 OH686_20045: OH686_20045 - RNA polymerase sigma factor RpoE, at 4,101,081 to 4,101,662 _20045 OH686_20050: OH686_20050 - Sigma factor RpoE negative regulatory protein RseA, at 4,101,700 to 4,102,281 _20050 OH686_20055: OH686_20055 - Sigma factor RpoE negative regulatory protein RseB precursor, at 4,102,290 to 4,103,228 _20055
Group Condition OH686_20035 OH686_20040 OH686_20045 OH686_20050 OH686_20055
carbon source octanoate (C) -0.2 -2.3 -4.4 N.D. N.D.
carbon source octanoate (C) -0.3 -1.7 -4.6 N.D. N.D.
carbon source octanoate (C) -0.1 -1.8 -4.5 N.D. N.D.
carbon source octanoate (C) -0.1 -1.7 -4.1 N.D. N.D.
carbon source octanoate (C) +0.5 -2.1 -2.8 N.D. N.D.
carbon source octanoate (C) +0.5 -1.8 -3.1 N.D. N.D.
carbon source D-Glucose (C) -0.0 -1.2 -1.1 N.D. N.D.
carbon source D-Glucose (C) -0.1 -1.1 -1.1 N.D. N.D.
carbon source D-Glucose (C) +0.0 -0.9 -1.1 N.D. N.D.
carbon source D-Glucose (C) -0.1 -0.9 -0.8 N.D. N.D.
carbon source Trisodium citrate (C) +0.1 -1.4 -0.3 N.D. N.D.
carbon source D-Glucose (C) -0.2 -0.8 -0.4 N.D. N.D.
carbon source acetate (C) +0.2 -1.2 -0.4 N.D. N.D.
carbon source D-Glucose (C) -0.2 -0.8 -0.4 N.D. N.D.
carbon source acetate (C) -0.1 -0.9 -0.4 N.D. N.D.
carbon source acetate (C) -0.2 -1.2 +0.1 N.D. N.D.
carbon source acetate (C) -0.2 -1.3 +0.3 N.D. N.D.
carbon source acetate (C) -0.1 -0.9 -0.1 N.D. N.D.
carbon source acetate (C) -0.3 -0.8 +0.1 N.D. N.D.
carbon source acetate (C) +0.2 -1.1 -0.0 N.D. N.D.
carbon source acetate (C) +0.2 -1.0 +0.0 N.D. N.D.
carbon source D-Glucose (C) -0.3 -0.4 +0.1 N.D. N.D.
carbon source D-Glucose (C) -0.1 -0.6 +0.1 N.D. N.D.
carbon source D-Glucose (C) -0.1 -0.6 +0.1 N.D. N.D.
carbon source D-Glucose (C) -0.1 -0.6 +0.2 N.D. N.D.
carbon source D,L-Malic Acid (C) -0.4 -0.2 +0.1 N.D. N.D.
carbon source D-Glucose (C) -0.2 -0.4 +0.3 N.D. N.D.
carbon source D,L-Malic Acid (C) -0.1 -0.4 +0.2 N.D. N.D.
carbon source Trisodium citrate (C) -0.2 -0.3 +0.5 N.D. N.D.
carbon source Trisodium citrate (C) +0.1 -0.4 +0.4 N.D. N.D.
remove
OH686_20035
plot		 remove
OH686_20040
plot		 remove
OH686_20045		 remove
OH686_20050
plot		 remove
OH686_20055
plot