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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_19135 and OH686_19140 are separated by 53 nucleotides
OH686_19140 and OH686_19145 are separated by 1 nucleotides
OH686_19145 and OH686_19150 are separated by 10 nucleotides
OH686_19150 and OH686_19155 overlap by 1 nucleotides
OH686_19135: OH686_19135 - Holliday junction DNA helicase RuvB, at 3,950,095 to 3,951,147
_19135
OH686_19140: OH686_19140 - tol-pal system-associated acyl-CoA thioesterase, at 3,951,201 to 3,951,644
_19140
OH686_19145: OH686_19145 - protein TolQ, at 3,951,646 to 3,952,347
_19145
OH686_19150: OH686_19150 - protein TolR, at 3,952,358 to 3,952,816
_19150
OH686_19155: OH686_19155 - protein TolA, at 3,952,816 to 3,953,772
_19155
Group
Condition
OH686
_19135
OH686
_19140
OH686
_19145
OH686
_19150
OH686
_19155
carbon source
octanoate (C)
-2.1
-0.7
N.D.
N.D.
N.D.
carbon source
octanoate (C)
-1.5
-1.1
N.D.
N.D.
N.D.
carbon source
octanoate (C)
-1.6
-0.9
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-1.7
-0.3
N.D.
N.D.
N.D.
carbon source
octanoate (C)
-1.5
-0.4
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-1.2
-0.3
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-1.2
-0.1
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-1.1
-0.0
N.D.
N.D.
N.D.
carbon source
acetate (C)
-1.1
-0.1
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-1.0
-0.2
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-1.1
-0.1
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-1.1
-0.0
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-1.1
+0.0
N.D.
N.D.
N.D.
carbon source
octanoate (C)
-0.7
-0.4
N.D.
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
-1.0
-0.1
N.D.
N.D.
N.D.
carbon source
Sorgoleone (C)
-1.0
-0.1
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-1.0
-0.1
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-1.1
+0.0
N.D.
N.D.
N.D.
carbon source
acetate (C)
-1.0
-0.0
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-1.0
-0.0
N.D.
N.D.
N.D.
carbon source
Sorgoleone (C)
-1.0
-0.0
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-1.0
+0.0
N.D.
N.D.
N.D.
carbon source
acetate (C)
-0.9
-0.0
N.D.
N.D.
N.D.
carbon source
acetate (C)
-0.8
-0.1
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-0.9
+0.0
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-1.0
+0.1
N.D.
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
-0.8
-0.0
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.9
+0.0
N.D.
N.D.
N.D.
carbon source
acetate (C)
-0.8
+0.1
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.8
+0.1
N.D.
N.D.
N.D.
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