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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_18535 and OH686_18540 are separated by 76 nucleotides
OH686_18540 and OH686_18545 are separated by 2 nucleotides
OH686_18545 and OH686_18550 are separated by 14 nucleotides
OH686_18550 and OH686_18555 overlap by 4 nucleotides
OH686_18535: OH686_18535 - cytochrome c552' product='cytochrome c552, at 3,847,359 to 3,847,673
_18535
OH686_18540: OH686_18540 - isoquinoline 1-oxidoreductase subunit alpha , at 3,847,750 to 3,848,217
_18540
OH686_18545: OH686_18545 - Uncharacterized aldehyde oxidase, molybdopterin-binding subunit, at 3,848,220 to 3,850,394
_18545
OH686_18550: OH686_18550 - GTP 3',8-cyclase , at 3,850,409 to 3,851,377
_18550
OH686_18555: OH686_18555 - Xanthine and CO maturation factor, XdhC/CoxF family, at 3,851,374 to 3,852,543
_18555
Group
Condition
OH686
_18535
OH686
_18540
OH686
_18545
OH686
_18550
OH686
_18555
carbon source
octanoate (C)
-0.5
-0.3
-0.0
+0.1
+0.0
carbon source
D-Glucose (C)
-0.1
-0.1
-0.1
+0.0
-0.1
carbon source
octanoate (C)
-0.2
-0.0
+0.0
-0.0
-0.0
carbon source
Sorgoleone (C)
-0.2
-0.1
-0.0
-0.0
+0.1
carbon source
D-Glucose (C)
+0.0
-0.0
-0.0
-0.1
+0.0
carbon source
D-Glucose (C)
-0.0
-0.1
-0.0
-0.1
+0.0
carbon source
D-Glucose (C)
+0.1
-0.1
-0.0
+0.1
-0.0
carbon source
acetate (C)
-0.1
+0.0
+0.0
+0.0
-0.0
carbon source
Sorgoleone (C)
-0.1
-0.1
+0.0
+0.1
+0.0
carbon source
D,L-Malic Acid (C)
+0.1
-0.1
-0.0
+0.0
-0.0
carbon source
D,L-Malic Acid (C)
+0.1
-0.0
-0.0
-0.0
+0.0
carbon source
D-Glucose (C)
+0.0
+0.0
-0.1
-0.0
+0.1
carbon source
D-Glucose (C)
+0.1
-0.0
-0.0
-0.0
-0.0
carbon source
Trisodium citrate (C)
+0.0
+0.1
+0.0
-0.1
-0.0
carbon source
octanoate (C)
+0.1
+0.1
-0.0
+0.1
-0.1
carbon source
D-Glucose (C)
-0.0
-0.0
+0.0
+0.1
+0.1
carbon source
D-Glucose (C)
+0.1
+0.0
+0.0
-0.0
-0.0
carbon source
Sorgoleone (C)
-0.0
+0.1
+0.0
-0.0
+0.1
carbon source
Trisodium citrate (C)
+0.1
-0.0
-0.0
+0.0
-0.0
carbon source
acetate (C)
+0.1
-0.0
+0.0
+0.1
-0.0
carbon source
Trisodium citrate (C)
+0.1
+0.0
-0.0
+0.0
+0.0
carbon source
octanoate (C)
+0.1
+0.1
+0.0
+0.1
-0.1
carbon source
D-Glucose (C)
-0.0
+0.1
+0.0
+0.1
+0.0
carbon source
acetate (C)
+0.1
-0.0
-0.0
+0.1
+0.0
carbon source
acetate (C)
+0.2
-0.0
-0.0
+0.2
-0.1
carbon source
acetate (C)
+0.0
+0.0
+0.0
+0.2
-0.0
carbon source
acetate (C)
+0.1
-0.0
+0.0
+0.2
+0.0
carbon source
octanoate (C)
+0.1
+0.1
+0.0
+0.2
+0.0
carbon source
octanoate (C)
+0.2
+0.0
-0.0
+0.1
+0.0
carbon source
acetate (C)
+0.2
+0.0
+0.1
+0.2
+0.0
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