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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_18345 and OH686_18350 are separated by 82 nucleotides
OH686_18350 and OH686_18355 are separated by 9 nucleotides
OH686_18355 and OH686_18360 are separated by 257 nucleotides
OH686_18360 and OH686_18365 are separated by 73 nucleotides
OH686_18345: OH686_18345 - hypothetical protein, at 3,816,838 to 3,817,242
_18345
OH686_18350: OH686_18350 - Pseudouridine synthase , type, at 3,817,325 to 3,818,239
_18350
OH686_18355: OH686_18355 - Transcriptional regulator, AraC family, at 3,818,249 to 3,819,166
_18355
OH686_18360: OH686_18360 - Short-chain dehydrogenase/reductase SDR, at 3,819,424 to 3,820,161
_18360
OH686_18365: OH686_18365 - hypothetical protein' product='hypothetical protein, at 3,820,235 to 3,820,543
_18365
Group
Condition
OH686
_18345
OH686
_18350
OH686
_18355
OH686
_18360
OH686
_18365
carbon source
D-Glucose (C)
-0.6
+0.1
-0.0
-0.4
N.D.
carbon source
D-Glucose (C)
-0.6
-0.1
-0.1
+0.0
N.D.
carbon source
acetate (C)
-0.2
-0.3
-0.0
-0.2
N.D.
carbon source
Sorgoleone (C)
-0.2
-0.3
+0.1
-0.4
N.D.
carbon source
acetate (C)
-0.4
-0.2
+0.0
-0.1
N.D.
carbon source
D-Glucose (C)
-0.6
-0.1
+0.0
+0.0
N.D.
carbon source
D-Glucose (C)
-0.1
-0.3
-0.1
-0.1
N.D.
carbon source
D-Glucose (C)
-0.3
-0.1
+0.0
-0.1
N.D.
carbon source
Sorgoleone (C)
-0.2
-0.3
+0.0
+0.1
N.D.
carbon source
Trisodium citrate (C)
-0.3
-0.1
+0.0
+0.0
N.D.
carbon source
D-Glucose (C)
-0.4
-0.2
-0.0
+0.4
N.D.
carbon source
acetate (C)
-0.4
-0.1
+0.1
+0.2
N.D.
carbon source
acetate (C)
-0.3
-0.1
+0.1
+0.2
N.D.
carbon source
Sorgoleone (C)
-0.4
-0.0
+0.1
+0.1
N.D.
carbon source
octanoate (C)
+0.3
-0.7
+0.1
+0.2
N.D.
carbon source
acetate (C)
-0.2
+0.1
+0.1
+0.0
N.D.
carbon source
Trisodium citrate (C)
-0.1
-0.2
+0.1
+0.3
N.D.
carbon source
octanoate (C)
-0.6
-0.2
+0.2
+0.8
N.D.
carbon source
Trisodium citrate (C)
-0.1
+0.3
+0.1
-0.1
N.D.
carbon source
acetate (C)
-0.2
+0.2
+0.1
+0.1
N.D.
carbon source
Trisodium citrate (C)
-0.1
+0.1
+0.0
+0.3
N.D.
carbon source
D-Glucose (C)
-0.1
+0.0
+0.2
+0.3
N.D.
carbon source
D-Glucose (C)
-0.2
-0.2
+0.2
+0.5
N.D.
carbon source
D,L-Malic Acid (C)
+0.0
-0.1
+0.1
+0.4
N.D.
carbon source
Trisodium citrate (C)
+0.2
+0.0
+0.2
+0.3
N.D.
carbon source
acetate (C)
+0.5
+0.2
+0.0
+0.2
N.D.
carbon source
octanoate (C)
-0.0
-0.2
-0.0
+1.4
N.D.
carbon source
octanoate (C)
-0.2
+0.4
+0.2
+0.9
N.D.
carbon source
octanoate (C)
+0.1
+0.3
+0.3
+0.5
N.D.
carbon source
octanoate (C)
-0.9
-0.0
+0.2
+2.0
N.D.
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