Fitness for 5 genes in Pseudomonas sp. S08-1

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500 ntOH686_16625 and OH686_16630 are separated by 7 nucleotidesOH686_16630 and OH686_16635 are separated by 113 nucleotidesOH686_16635 and OH686_16640 overlap by 4 nucleotidesOH686_16640 and OH686_16645 are separated by 151 nucleotides OH686_16625: OH686_16625 - diguanylate cyclase (GGDEF domain) with PAS/PAC sensor, at 3,477,337 to 3,477,780 _16625 OH686_16630: OH686_16630 - Chemotaxis protein CheC -- inhibitor of MCP methylation, at 3,477,788 to 3,478,786 _16630 OH686_16635: OH686_16635 - hypothetical protein, at 3,478,900 to 3,480,621 _16635 OH686_16640: OH686_16640 - ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron), at 3,480,618 to 3,481,655 _16640 OH686_16645: OH686_16645 - Small-conductance mechanosensitive channel, at 3,481,807 to 3,482,661 _16645
Group Condition OH686_16625 OH686_16630 OH686_16635 OH686_16640 OH686_16645
carbon source acetate (C) -0.4 -0.0 -0.1 -0.1 -0.0
carbon source octanoate (C) -0.3 -0.2 -0.1 +0.2 -0.1
carbon source acetate (C) -0.1 -0.1 +0.0 -0.2 -0.1
carbon source Sorgoleone (C) +0.0 +0.1 -0.2 -0.1 -0.2
carbon source acetate (C) -0.1 +0.0 -0.2 -0.1 -0.1
carbon source D-Glucose (C) -0.1 +0.1 -0.1 -0.0 -0.2
carbon source Sorgoleone (C) -0.1 -0.1 -0.1 +0.0 +0.0
carbon source D,L-Malic Acid (C) -0.2 +0.2 -0.1 -0.0 -0.1
carbon source Trisodium citrate (C) -0.2 +0.1 +0.0 -0.0 -0.2
carbon source D-Glucose (C) -0.2 +0.0 -0.1 -0.1 +0.1
carbon source D-Glucose (C) -0.1 +0.2 -0.0 +0.0 -0.2
carbon source D,L-Malic Acid (C) -0.0 +0.2 -0.1 -0.1 -0.2
carbon source Trisodium citrate (C) -0.1 +0.2 -0.0 -0.1 -0.1
carbon source acetate (C) -0.0 +0.1 +0.0 -0.1 -0.1
carbon source octanoate (C) -0.4 +0.0 +0.3 -0.1 +0.1
carbon source D,L-Malic Acid (C) -0.0 +0.1 +0.0 -0.1 -0.1
carbon source acetate (C) +0.0 +0.3 -0.2 -0.1 -0.1
carbon source D-Glucose (C) -0.1 -0.1 +0.2 -0.1 +0.0
carbon source Trisodium citrate (C) +0.0 +0.1 -0.0 -0.0 -0.2
carbon source acetate (C) -0.2 +0.3 -0.0 -0.1 -0.0
carbon source octanoate (C) -0.2 -0.2 +0.1 +0.1 +0.1
carbon source Trisodium citrate (C) +0.0 +0.2 -0.1 +0.0 -0.1
carbon source D-Glucose (C) -0.1 +0.2 +0.1 +0.0 -0.1
carbon source D-Glucose (C) -0.0 +0.3 -0.1 -0.0 -0.0
carbon source D-Glucose (C) +0.1 +0.3 -0.1 -0.1 +0.0
carbon source octanoate (C) +0.4 +0.2 -0.0 -0.3 -0.1
carbon source Trisodium citrate (C) -0.1 +0.2 +0.1 +0.0 +0.1
carbon source octanoate (C) -0.4 +0.5 +0.0 +0.2 +0.1
carbon source octanoate (C) +0.0 +0.1 +0.3 +0.1 -0.1
carbon source Trisodium citrate (C) +0.0 +0.4 -0.0 +0.1 +0.0
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