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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_16560 and OH686_16565 are separated by 10 nucleotides
OH686_16565 and OH686_16570 are separated by 278 nucleotides
OH686_16570 and OH686_16575 are separated by 190 nucleotides
OH686_16575 and OH686_16580 are separated by 10 nucleotides
OH686_16560: OH686_16560 - Two-component transcriptional response regulator, LuxR family, at 3,462,461 to 3,463,099
_16560
OH686_16565: OH686_16565 - Two-component system sensor histidine kinase/response regulator hybrid, at 3,463,110 to 3,466,508
_16565
OH686_16570: OH686_16570 - Urea ABC transporter, substrate-binding protein UrtA, at 3,466,787 to 3,468,022
_16570
OH686_16575: OH686_16575 - urea ABC transporter, permease protein UrtB, at 3,468,213 to 3,469,130
_16575
OH686_16580: OH686_16580 - urea ABC transporter, permease protein UrtC, at 3,469,141 to 3,470,313
_16580
Group
Condition
OH686
_16560
OH686
_16565
OH686
_16570
OH686
_16575
OH686
_16580
carbon source
octanoate (C)
-0.1
+0.0
-0.1
-0.4
-0.3
carbon source
D,L-Malic Acid (C)
-0.1
+0.0
-0.1
-0.1
+0.0
carbon source
D-Glucose (C)
-0.1
-0.1
+0.0
-0.1
+0.0
carbon source
D,L-Malic Acid (C)
+0.0
+0.0
-0.1
+0.1
-0.1
carbon source
Sorgoleone (C)
-0.1
+0.0
-0.1
-0.0
+0.1
carbon source
octanoate (C)
+0.0
-0.0
+0.1
-0.2
+0.1
carbon source
D-Glucose (C)
+0.0
+0.1
-0.0
-0.1
+0.0
carbon source
acetate (C)
-0.0
+0.0
+0.0
-0.1
+0.0
carbon source
Trisodium citrate (C)
-0.0
+0.1
+0.0
-0.1
+0.0
carbon source
acetate (C)
-0.0
+0.1
-0.0
-0.1
+0.2
carbon source
acetate (C)
-0.1
+0.1
+0.0
+0.0
+0.0
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.0
-0.1
+0.2
carbon source
acetate (C)
+0.0
-0.1
-0.0
+0.1
+0.1
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.1
+0.0
+0.1
carbon source
D-Glucose (C)
-0.1
+0.1
+0.0
+0.0
+0.1
carbon source
octanoate (C)
-0.0
-0.1
+0.1
+0.0
+0.1
carbon source
Trisodium citrate (C)
-0.0
+0.1
-0.1
+0.2
+0.0
carbon source
Sorgoleone (C)
-0.0
+0.1
+0.0
-0.0
+0.1
carbon source
acetate (C)
-0.1
+0.0
+0.0
+0.1
+0.1
carbon source
octanoate (C)
-0.1
-0.0
+0.1
+0.2
+0.1
carbon source
Trisodium citrate (C)
+0.0
+0.1
+0.0
-0.0
+0.2
carbon source
D-Glucose (C)
+0.1
+0.0
-0.0
+0.1
+0.1
carbon source
D-Glucose (C)
+0.0
-0.0
+0.0
+0.1
+0.1
carbon source
octanoate (C)
+0.0
+0.2
+0.1
-0.0
-0.0
carbon source
acetate (C)
+0.1
+0.1
+0.1
-0.1
+0.1
carbon source
Sorgoleone (C)
+0.0
+0.1
+0.2
-0.1
+0.1
carbon source
Trisodium citrate (C)
+0.1
+0.1
-0.0
-0.0
+0.2
carbon source
acetate (C)
+0.1
+0.1
+0.1
-0.1
+0.1
carbon source
D-Glucose (C)
+0.1
+0.1
+0.1
+0.1
+0.1
carbon source
octanoate (C)
-0.1
+0.2
+0.3
+0.1
+0.3
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