Fitness for 5 genes in Pseudomonas sp. S08-1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 41 experiments or choose conditions or try the comparative fitness browser

500 ntOH686_16405 and OH686_16410 are separated by 147 nucleotidesOH686_16410 and OH686_16415 overlap by 17 nucleotidesOH686_16415 and OH686_16420 are separated by 121 nucleotidesOH686_16420 and OH686_16425 are separated by 46 nucleotides OH686_16405: OH686_16405 - Outer membrane beta-barrel assembly protein BamD, at 3,431,757 to 3,432,782 _16405 OH686_16410: OH686_16410 - LSU rRNA pseudouridine(1911/1915/1917) synthase , at 3,432,930 to 3,433,901 _16410 OH686_16415: OH686_16415 - Multicopper polyphenol oxidase, at 3,433,885 to 3,434,619 _16415 OH686_16420: OH686_16420 - ATP-dependent chaperone protein ClpB, at 3,434,741 to 3,437,305 _16420 OH686_16425: OH686_16425 - hypothetical protein, at 3,437,352 to 3,437,690 _16425
Group Condition OH686_16405 OH686_16410 OH686_16415 OH686_16420 OH686_16425
carbon source octanoate (C) -0.1 -1.9 -0.9 -0.2 -0.3
carbon source octanoate (C) +0.0 -1.1 +0.0 +0.0 -0.6
carbon source octanoate (C) -0.6 -0.7 +0.1 +0.0 -0.4
carbon source D-Glucose (C) -0.3 -0.7 +0.0 -0.1 -0.3
carbon source D-Glucose (C) -0.5 -0.8 -0.0 +0.1 -0.1
carbon source Sorgoleone (C) -0.3 -0.6 +0.1 -0.0 -0.4
carbon source Sorgoleone (C) -0.4 -0.7 +0.1 +0.0 +0.1
carbon source D,L-Malic Acid (C) +0.1 -0.5 -0.1 -0.2 -0.3
carbon source octanoate (C) -1.0 -0.2 +0.2 +0.1 +0.0
carbon source Sorgoleone (C) -0.2 -0.5 -0.0 +0.0 -0.1
carbon source octanoate (C) -0.5 -0.8 +0.2 -0.0 +0.4
carbon source D,L-Malic Acid (C) -0.2 -0.5 +0.1 +0.1 -0.2
carbon source D-Glucose (C) -0.1 -0.4 +0.1 -0.1 -0.0
carbon source D-Glucose (C) -0.1 -0.5 +0.1 -0.0 +0.1
carbon source D-Glucose (C) +0.1 -0.7 -0.0 -0.0 +0.1
carbon source Trisodium citrate (C) -0.2 +0.1 -0.1 -0.1 -0.2
carbon source D-Glucose (C) +0.1 -0.5 +0.2 +0.2 -0.3
carbon source acetate (C) -0.5 +0.0 +0.1 +0.1 -0.1
carbon source D-Glucose (C) -0.2 -0.6 +0.2 +0.1 +0.1
carbon source Sorgoleone (C) -0.0 -0.6 +0.1 +0.0 +0.2
carbon source D-Glucose (C) -0.2 -0.4 +0.0 +0.2 +0.3
carbon source D-Glucose (C) -0.2 +0.1 +0.1 +0.1 -0.2
carbon source D-Glucose (C) -0.2 -0.5 +0.0 +0.2 +0.4
carbon source D,L-Malic Acid (C) -0.2 +0.1 +0.2 +0.3 -0.2
carbon source Trisodium citrate (C) -0.1 -0.1 +0.1 +0.1 +0.3
carbon source D-Glucose (C) +0.1 -0.4 -0.1 +0.2 +0.5
carbon source acetate (C) +0.5 +0.2 +0.1 +0.1 -0.4
carbon source octanoate (C) +1.0 -0.9 -1.1 -0.0 +1.6
carbon source Trisodium citrate (C) +0.4 -0.1 +0.1 +0.1 -0.0
carbon source acetate (C) +0.3 +0.2 +0.3 +0.1 -0.1
remove
OH686_16405
plot		 remove
OH686_16410
plot		 remove
OH686_16415		 remove
OH686_16420
plot		 remove
OH686_16425
plot