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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_16365 and OH686_16370 are separated by 10 nucleotides
OH686_16370 and OH686_16375 are separated by 593 nucleotides
OH686_16375 and OH686_16380 are separated by 11 nucleotides
OH686_16380 and OH686_16385 are separated by 108 nucleotides
OH686_16365: OH686_16365 - Type IV fimbrial biogenesis protein PilW, at 3,422,369 to 3,423,091
_16365
OH686_16370: OH686_16370 - hypothetical protein, at 3,423,102 to 3,423,569
_16370
OH686_16375: OH686_16375 - hypothetical protein, at 3,424,163 to 3,426,832
_16375
OH686_16380: OH686_16380 - Type IV pilus biogenesis protein PilE, at 3,426,844 to 3,427,248
_16380
OH686_16385: OH686_16385 - Glycine oxidase ThiO , at 3,427,357 to 3,428,412
_16385
Group
Condition
OH686
_16365
OH686
_16370
OH686
_16375
OH686
_16380
OH686
_16385
carbon source
D-Glucose (C)
-1.4
-1.0
-1.0
+0.1
-1.8
carbon source
D-Glucose (C)
-1.2
-1.0
-0.9
+0.2
-1.9
carbon source
D-Glucose (C)
-1.4
-0.8
-0.8
+0.1
-2.0
carbon source
D-Glucose (C)
-1.2
-0.8
-0.9
-0.0
-1.8
carbon source
D-Glucose (C)
-0.7
-0.3
-0.4
+0.0
-1.4
carbon source
D-Glucose (C)
-1.0
-0.2
-0.4
-0.0
-1.0
carbon source
D-Glucose (C)
-0.6
+0.0
-0.3
-0.1
-0.7
carbon source
D-Glucose (C)
-0.5
-0.3
-0.2
+0.1
-0.6
carbon source
octanoate (C)
-1.0
+0.3
-0.1
-0.1
-0.4
carbon source
D-Glucose (C)
-0.3
-0.1
-0.2
+0.1
-0.8
carbon source
D-Glucose (C)
-0.4
-0.1
-0.2
-0.0
-0.5
carbon source
D-Glucose (C)
-0.2
-0.1
-0.3
+0.0
-0.6
carbon source
Trisodium citrate (C)
-0.1
-0.5
-0.1
-0.1
-0.3
carbon source
D-Glucose (C)
-0.3
-0.1
-0.2
+0.1
-0.6
carbon source
Trisodium citrate (C)
-0.3
-0.2
-0.2
-0.1
-0.4
carbon source
Trisodium citrate (C)
-0.2
-0.1
-0.1
-0.1
-0.5
carbon source
Trisodium citrate (C)
-0.2
-0.2
-0.1
+0.0
-0.5
carbon source
Trisodium citrate (C)
-0.1
-0.4
-0.1
+0.1
-0.5
carbon source
D,L-Malic Acid (C)
-0.2
-0.2
-0.2
+0.0
-0.3
carbon source
octanoate (C)
-1.0
-0.1
+0.0
+0.4
-0.1
carbon source
D,L-Malic Acid (C)
-0.2
-0.1
-0.1
-0.1
-0.3
carbon source
Trisodium citrate (C)
-0.2
-0.2
-0.1
+0.1
-0.4
carbon source
octanoate (C)
-0.4
-0.2
+0.2
-0.1
-0.1
carbon source
D,L-Malic Acid (C)
-0.3
+0.2
-0.2
+0.1
-0.4
carbon source
Trisodium citrate (C)
-0.4
+0.2
-0.1
+0.0
-0.4
carbon source
octanoate (C)
-0.7
-0.2
+0.2
+0.1
-0.1
carbon source
Trisodium citrate (C)
-0.1
+0.2
-0.1
-0.0
-0.5
carbon source
Sorgoleone (C)
+0.2
+0.5
+0.2
+0.0
-0.1
carbon source
acetate (C)
+0.2
+0.4
+0.2
+0.1
+0.1
carbon source
octanoate (C)
+0.2
+0.7
+0.2
+0.3
+0.2
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