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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_15745 and OH686_15750 overlap by 8 nucleotides
OH686_15750 and OH686_15755 are separated by 63 nucleotides
OH686_15755 and OH686_15760 are separated by 362 nucleotides
OH686_15760 and OH686_15765 are separated by 81 nucleotides
OH686_15745: OH686_15745 - Uncharacterized MFS-type transporter, at 3,280,928 to 3,281,347
_15745
OH686_15750: OH686_15750 - Vitamin B12 ABC transporter, substrate-binding protein BtuF, at 3,281,340 to 3,282,140
_15750
OH686_15755: OH686_15755 - Outer membrane vitamin B12 receptor BtuB, at 3,282,204 to 3,284,090
_15755
OH686_15760: OH686_15760 - 1-deoxy-D-xylulose-5-phosphate synthase, at 3,284,453 to 3,286,348
_15760
OH686_15765: OH686_15765 - Epoxide hydrolase , at 3,286,430 to 3,287,380
_15765
Group
Condition
OH686
_15745
OH686
_15750
OH686
_15755
OH686
_15760
OH686
_15765
carbon source
octanoate (C)
-0.8
-0.3
+0.0
N.D.
-0.1
carbon source
Sorgoleone (C)
-0.3
-0.0
-0.0
N.D.
-0.0
carbon source
Sorgoleone (C)
-0.3
-0.0
-0.1
N.D.
+0.1
carbon source
D,L-Malic Acid (C)
-0.2
-0.1
-0.0
N.D.
+0.1
carbon source
Trisodium citrate (C)
-0.3
+0.1
+0.0
N.D.
+0.1
carbon source
Trisodium citrate (C)
-0.3
+0.1
+0.0
N.D.
+0.1
carbon source
acetate (C)
+0.1
-0.2
+0.0
N.D.
+0.1
carbon source
D-Glucose (C)
-0.2
-0.0
+0.0
N.D.
+0.2
carbon source
acetate (C)
+0.1
+0.1
-0.1
N.D.
-0.1
carbon source
D-Glucose (C)
+0.0
-0.1
-0.1
N.D.
+0.2
carbon source
D-Glucose (C)
+0.1
+0.0
-0.2
N.D.
+0.2
carbon source
octanoate (C)
-0.2
+0.1
+0.0
N.D.
+0.3
carbon source
octanoate (C)
-0.5
-0.1
-0.0
N.D.
+0.8
carbon source
Trisodium citrate (C)
+0.2
+0.2
-0.2
N.D.
-0.0
carbon source
D-Glucose (C)
+0.3
-0.0
-0.1
N.D.
+0.1
carbon source
D-Glucose (C)
+0.3
-0.1
-0.0
N.D.
+0.1
carbon source
D-Glucose (C)
+0.2
-0.0
+0.0
N.D.
+0.1
carbon source
D-Glucose (C)
+0.2
-0.1
-0.1
N.D.
+0.3
carbon source
octanoate (C)
-0.5
+0.1
+0.3
N.D.
+0.4
carbon source
acetate (C)
+0.3
+0.0
-0.0
N.D.
+0.1
carbon source
Sorgoleone (C)
+0.2
+0.1
-0.0
N.D.
+0.1
carbon source
D-Glucose (C)
+0.1
+0.1
+0.1
N.D.
+0.1
carbon source
Trisodium citrate (C)
+0.3
-0.1
-0.0
N.D.
+0.2
carbon source
Trisodium citrate (C)
+0.2
+0.1
+0.0
N.D.
+0.1
carbon source
Trisodium citrate (C)
+0.2
+0.1
+0.1
N.D.
+0.1
carbon source
D-Glucose (C)
+0.3
+0.1
+0.1
N.D.
+0.2
carbon source
octanoate (C)
+0.6
+0.1
+0.1
N.D.
+0.1
carbon source
D-Glucose (C)
+0.5
+0.1
+0.1
N.D.
+0.2
carbon source
D-Glucose (C)
+0.7
+0.2
+0.0
N.D.
+0.1
carbon source
octanoate (C)
+0.2
+0.1
+0.2
N.D.
+0.6
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