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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_14490 and OH686_14495 overlap by 1 nucleotides
OH686_14495 and OH686_14500 are separated by 55 nucleotides
OH686_14500 and OH686_14505 are separated by 13 nucleotides
OH686_14505 and OH686_14510 are separated by 416 nucleotides
OH686_14490: OH686_14490 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 3,029,971 to 3,030,660
_14490
OH686_14495: OH686_14495 - ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines), at 3,030,660 to 3,031,352
_14495
OH686_14500: OH686_14500 - ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines), at 3,031,408 to 3,032,160
_14500
OH686_14505: OH686_14505 - ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines), at 3,032,174 to 3,032,947
_14505
OH686_14510: OH686_14510 - Adenylate cyclase , at 3,033,364 to 3,035,205
_14510
Group
Condition
OH686
_14490
OH686
_14495
OH686
_14500
OH686
_14505
OH686
_14510
carbon source
octanoate (C)
-0.4
-0.3
-0.2
-0.1
+0.1
carbon source
octanoate (C)
-0.2
-0.4
-0.0
-0.0
+0.0
carbon source
octanoate (C)
-0.2
-0.3
-0.2
-0.2
+0.5
carbon source
octanoate (C)
-0.3
-0.2
-0.0
-0.1
+0.3
carbon source
D,L-Malic Acid (C)
+0.0
-0.1
+0.1
-0.2
-0.1
carbon source
Sorgoleone (C)
-0.0
-0.1
+0.1
-0.1
+0.0
carbon source
acetate (C)
-0.1
-0.1
+0.1
+0.1
-0.0
carbon source
acetate (C)
-0.1
-0.1
+0.1
+0.1
-0.0
carbon source
Sorgoleone (C)
+0.0
-0.0
-0.2
+0.2
-0.0
carbon source
acetate (C)
-0.0
-0.1
+0.1
+0.2
-0.0
carbon source
D-Glucose (C)
+0.1
-0.0
+0.2
-0.1
-0.0
carbon source
D,L-Malic Acid (C)
+0.0
-0.1
+0.2
+0.2
-0.0
carbon source
D-Glucose (C)
+0.1
-0.1
+0.1
+0.1
+0.1
carbon source
D-Glucose (C)
+0.2
-0.0
+0.0
+0.3
-0.0
carbon source
Trisodium citrate (C)
+0.1
-0.0
-0.0
+0.2
+0.1
carbon source
D-Glucose (C)
+0.1
+0.0
+0.1
+0.1
+0.0
carbon source
D-Glucose (C)
+0.1
-0.0
+0.1
+0.2
-0.0
carbon source
Trisodium citrate (C)
+0.1
-0.0
+0.2
+0.2
+0.0
carbon source
Trisodium citrate (C)
+0.1
+0.1
+0.1
+0.1
-0.0
carbon source
Trisodium citrate (C)
+0.0
+0.0
+0.2
+0.2
+0.1
carbon source
octanoate (C)
-0.2
-0.2
+0.2
+0.1
+0.5
carbon source
Trisodium citrate (C)
-0.0
-0.0
+0.2
+0.3
+0.1
carbon source
D-Glucose (C)
+0.1
+0.1
+0.1
+0.3
+0.0
carbon source
Trisodium citrate (C)
+0.1
-0.1
+0.2
+0.3
+0.0
carbon source
octanoate (C)
-0.1
+0.1
-0.1
+0.2
+0.5
carbon source
D-Glucose (C)
+0.2
+0.2
+0.2
+0.2
+0.1
carbon source
D-Glucose (C)
+0.5
+0.5
+0.5
+0.6
+0.2
carbon source
D-Glucose (C)
+0.6
+0.4
+0.5
+0.7
+0.2
carbon source
D-Glucose (C)
+0.6
+0.5
+0.6
+0.6
+0.1
carbon source
D-Glucose (C)
+0.5
+0.4
+0.6
+1.0
+0.2
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