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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_12665 and OH686_12670 are separated by 12 nucleotides
OH686_12670 and OH686_12675 are separated by 170 nucleotides
OH686_12675 and OH686_12680 are separated by 154 nucleotides
OH686_12680 and OH686_12685 are separated by 16 nucleotides
OH686_12665: OH686_12665 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 2,663,590 to 2,664,237
_12665
OH686_12670: OH686_12670 - Chromosome (plasmid) partitioning protein ParA, at 2,664,250 to 2,665,038
_12670
OH686_12675: OH686_12675 - Chromosome (plasmid) partitioning protein ParB, at 2,665,209 to 2,665,919
_12675
OH686_12680: OH686_12680 - ATP synthase protein I, at 2,666,074 to 2,666,481
_12680
OH686_12685: OH686_12685 - ATP synthase F0, A subunit, at 2,666,498 to 2,667,367
_12685
Group
Condition
OH686
_12665
OH686
_12670
OH686
_12675
OH686
_12680
OH686
_12685
carbon source
octanoate (C)
-1.6
N.D.
N.D.
N.D.
N.D.
carbon source
octanoate (C)
-1.1
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.5
N.D.
N.D.
N.D.
N.D.
carbon source
Sorgoleone (C)
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Sorgoleone (C)
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Sorgoleone (C)
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
octanoate (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Sorgoleone (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
octanoate (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
+0.4
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
+0.5
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
+0.5
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.5
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.6
N.D.
N.D.
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
+0.6
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
+0.6
N.D.
N.D.
N.D.
N.D.
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