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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_12345 and OH686_12350 are separated by 66 nucleotides
OH686_12350 and OH686_12355 are separated by 71 nucleotides
OH686_12355 and OH686_12360 overlap by 1 nucleotides
OH686_12360 and OH686_12365 are separated by 124 nucleotides
OH686_12345: OH686_12345 - Radical SAM domain protein, at 2,604,501 to 2,605,562
_12345
OH686_12350: OH686_12350 - hypothetical protein, at 2,605,629 to 2,606,117
_12350
OH686_12355: OH686_12355 - Uncharacterized protein, at 2,606,189 to 2,606,452
_12355
OH686_12360: OH686_12360 - Oligopeptidase A , at 2,606,452 to 2,608,500
_12360
OH686_12365: OH686_12365 - Protein YrdA, at 2,608,625 to 2,609,167
_12365
Group
Condition
OH686
_12345
OH686
_12350
OH686
_12355
OH686
_12360
OH686
_12365
carbon source
octanoate (C)
+0.1
-1.3
N.D.
-0.2
+0.4
carbon source
D,L-Malic Acid (C)
-0.2
-0.3
N.D.
-0.2
-0.2
carbon source
octanoate (C)
-0.1
-0.4
N.D.
-0.2
-0.0
carbon source
acetate (C)
-0.0
-0.6
N.D.
-0.2
+0.1
carbon source
Trisodium citrate (C)
-0.1
-0.6
N.D.
-0.1
+0.1
carbon source
D-Glucose (C)
+0.1
-0.6
N.D.
-0.1
-0.1
carbon source
octanoate (C)
-0.2
-0.4
N.D.
-0.1
+0.1
carbon source
D-Glucose (C)
-0.0
+0.1
N.D.
-0.5
-0.1
carbon source
D-Glucose (C)
-0.3
+0.3
N.D.
-0.5
-0.0
carbon source
D-Glucose (C)
+0.2
+0.2
N.D.
-0.6
-0.2
carbon source
D,L-Malic Acid (C)
-0.1
-0.3
N.D.
-0.2
+0.0
carbon source
octanoate (C)
-0.2
-0.1
N.D.
-0.4
+0.2
carbon source
D-Glucose (C)
+0.0
-0.4
N.D.
-0.1
+0.0
carbon source
D-Glucose (C)
+0.0
+0.1
N.D.
-0.6
+0.1
carbon source
Sorgoleone (C)
-0.2
-0.1
N.D.
-0.0
-0.0
carbon source
Trisodium citrate (C)
-0.1
-0.2
N.D.
-0.1
+0.1
carbon source
Trisodium citrate (C)
+0.1
-0.3
N.D.
-0.2
+0.0
carbon source
acetate (C)
-0.1
-0.0
N.D.
-0.2
+0.0
carbon source
acetate (C)
+0.1
-0.2
N.D.
-0.1
+0.0
carbon source
acetate (C)
+0.0
+0.1
N.D.
-0.3
+0.0
carbon source
acetate (C)
+0.0
+0.2
N.D.
-0.3
-0.0
carbon source
acetate (C)
-0.1
+0.2
N.D.
-0.3
+0.1
carbon source
D,L-Malic Acid (C)
-0.1
+0.4
N.D.
-0.2
-0.1
carbon source
octanoate (C)
+0.3
-0.3
N.D.
-0.1
+0.1
carbon source
D-Glucose (C)
+0.0
+0.2
N.D.
-0.1
+0.0
carbon source
Trisodium citrate (C)
-0.0
+0.2
N.D.
-0.1
+0.1
carbon source
acetate (C)
+0.0
+0.3
N.D.
-0.2
+0.0
carbon source
octanoate (C)
+0.2
+0.3
N.D.
-0.5
+0.1
carbon source
acetate (C)
-0.0
+0.3
N.D.
-0.0
+0.0
carbon source
D-Glucose (C)
+0.0
+0.3
N.D.
-0.0
-0.0
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