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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_12325 and OH686_12330 are separated by 188 nucleotides
OH686_12330 and OH686_12335 overlap by 105 nucleotides
OH686_12335 and OH686_12340 are separated by 46 nucleotides
OH686_12340 and OH686_12345 are separated by 97 nucleotides
OH686_12325: OH686_12325 - cytochrome c oxidase, subunit II, at 2,601,491 to 2,602,591
_12325
OH686_12330: OH686_12330 - hypothetical protein' product='hypothetical protein, at 2,602,780 to 2,603,094
_12330
OH686_12335: OH686_12335 - hypothetical protein, at 2,602,990 to 2,603,631
_12335
OH686_12340: OH686_12340 - Carbonic anhydrase, beta class , at 2,603,678 to 2,604,403
_12340
OH686_12345: OH686_12345 - Radical SAM domain protein, at 2,604,501 to 2,605,562
_12345
Group
Condition
OH686
_12325
OH686
_12330
OH686
_12335
OH686
_12340
OH686
_12345
carbon source
octanoate (C)
+0.1
-0.7
-1.3
N.D.
+0.1
carbon source
Trisodium citrate (C)
-0.0
-0.8
+0.0
N.D.
+0.0
carbon source
octanoate (C)
+0.2
-0.5
-0.2
N.D.
-0.2
carbon source
Sorgoleone (C)
+0.1
-0.3
-0.2
N.D.
-0.2
carbon source
Trisodium citrate (C)
+0.1
-0.6
+0.0
N.D.
-0.1
carbon source
Sorgoleone (C)
+0.1
-0.6
-0.0
N.D.
-0.0
carbon source
acetate (C)
-0.0
-0.5
-0.0
N.D.
-0.0
carbon source
octanoate (C)
+0.0
-0.4
-0.5
N.D.
+0.3
carbon source
octanoate (C)
+0.1
+0.0
-0.3
N.D.
-0.2
carbon source
Trisodium citrate (C)
+0.1
-0.4
+0.0
N.D.
-0.0
carbon source
D-Glucose (C)
+0.1
+0.3
-0.6
N.D.
+0.0
carbon source
D-Glucose (C)
+0.1
+0.0
-0.4
N.D.
+0.0
carbon source
D,L-Malic Acid (C)
+0.2
-0.1
-0.2
N.D.
-0.1
carbon source
D-Glucose (C)
-0.0
+0.2
-0.3
N.D.
-0.0
carbon source
Trisodium citrate (C)
+0.1
-0.6
+0.3
N.D.
+0.0
carbon source
D-Glucose (C)
+0.0
+0.8
-0.6
N.D.
-0.3
carbon source
acetate (C)
+0.2
+0.3
-0.3
N.D.
-0.1
carbon source
D-Glucose (C)
+0.1
+0.2
-0.3
N.D.
+0.0
carbon source
octanoate (C)
+0.1
+0.2
-0.1
N.D.
-0.1
carbon source
Trisodium citrate (C)
+0.1
-0.1
-0.1
N.D.
+0.1
carbon source
octanoate (C)
-0.0
+0.3
-0.3
N.D.
+0.2
carbon source
Trisodium citrate (C)
+0.1
-0.1
+0.3
N.D.
+0.0
carbon source
D,L-Malic Acid (C)
+0.1
+0.0
+0.2
N.D.
-0.1
carbon source
D-Glucose (C)
+0.1
+0.3
-0.1
N.D.
+0.1
carbon source
Sorgoleone (C)
+0.0
+0.2
+0.2
N.D.
-0.1
carbon source
D-Glucose (C)
+0.1
+0.4
-0.1
N.D.
+0.0
carbon source
D-Glucose (C)
-0.0
+0.7
-0.3
N.D.
+0.1
carbon source
acetate (C)
+0.1
+0.6
-0.1
N.D.
+0.0
carbon source
D-Glucose (C)
-0.1
+1.2
-0.5
N.D.
+0.0
carbon source
D-Glucose (C)
+0.0
+1.3
-0.5
N.D.
+0.2
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