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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_10545 and OH686_10550 are separated by 203 nucleotides
OH686_10550 and OH686_10555 are separated by 169 nucleotides
OH686_10555 and OH686_10560 are separated by 138 nucleotides
OH686_10560 and OH686_10565 are separated by 12 nucleotides
OH686_10545: OH686_10545 - putative iron-regulated membrane protein, at 2,160,590 to 2,161,741
_10545
OH686_10550: OH686_10550 - hypothetical protein, at 2,161,945 to 2,163,882
_10550
OH686_10555: OH686_10555 - Phosphoethanolamine transferase EptC [E.coli], specific for LPS heptose I residue, at 2,164,052 to 2,165,815
_10555
OH686_10560: OH686_10560 - ribosomal protein S21, at 2,165,954 to 2,166,283
_10560
OH686_10565: OH686_10565 - Methyl-accepting chemotaxis sensor/transducer protein, at 2,166,296 to 2,168,356
_10565
Group
Condition
OH686
_10545
OH686
_10550
OH686
_10555
OH686
_10560
OH686
_10565
carbon source
D-Glucose (C)
+0.1
+0.0
+0.1
-0.6
-0.0
carbon source
Trisodium citrate (C)
+0.1
-0.0
+0.1
-0.1
-0.0
carbon source
acetate (C)
+0.1
+0.0
-0.0
-0.1
+0.1
carbon source
acetate (C)
+0.0
+0.1
+0.0
-0.1
+0.0
carbon source
acetate (C)
-0.0
-0.0
-0.0
+0.2
-0.0
carbon source
acetate (C)
+0.1
+0.1
-0.1
-0.0
+0.1
carbon source
Trisodium citrate (C)
+0.2
-0.1
+0.0
+0.0
+0.0
carbon source
octanoate (C)
+0.1
+0.1
+0.1
-0.1
-0.0
carbon source
acetate (C)
-0.1
-0.0
+0.0
+0.2
+0.0
carbon source
D-Glucose (C)
+0.1
-0.0
+0.0
-0.1
+0.1
carbon source
D-Glucose (C)
+0.0
-0.1
-0.0
+0.2
+0.1
carbon source
acetate (C)
-0.0
+0.0
-0.0
+0.2
+0.1
carbon source
D-Glucose (C)
+0.0
+0.1
+0.0
+0.1
+0.1
carbon source
D-Glucose (C)
-0.1
+0.0
-0.0
+0.1
+0.2
carbon source
octanoate (C)
+0.0
+0.1
+0.0
+0.2
-0.0
carbon source
Trisodium citrate (C)
+0.1
-0.1
+0.0
+0.2
+0.1
carbon source
D,L-Malic Acid (C)
+0.1
+0.1
+0.0
+0.0
+0.1
carbon source
D-Glucose (C)
+0.0
+0.0
+0.0
+0.1
+0.1
carbon source
D-Glucose (C)
+0.0
+0.0
-0.0
+0.3
+0.1
carbon source
Trisodium citrate (C)
+0.0
+0.2
-0.0
+0.1
+0.1
carbon source
Trisodium citrate (C)
+0.1
+0.0
-0.0
+0.2
+0.0
carbon source
Sorgoleone (C)
+0.2
+0.0
+0.0
+0.1
+0.1
carbon source
D-Glucose (C)
+0.1
-0.0
+0.0
+0.2
+0.2
carbon source
octanoate (C)
-0.1
-0.0
+0.1
+0.4
+0.0
carbon source
Trisodium citrate (C)
+0.0
+0.0
+0.0
+0.3
+0.1
carbon source
Trisodium citrate (C)
+0.1
-0.1
+0.0
+0.2
+0.2
carbon source
Sorgoleone (C)
+0.1
+0.0
+0.0
+0.2
+0.2
carbon source
octanoate (C)
+0.1
+0.0
+0.0
+0.1
+0.2
carbon source
octanoate (C)
+0.1
+0.0
+0.0
+0.3
+0.2
carbon source
octanoate (C)
+0.1
-0.1
+0.0
+0.5
+0.2
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