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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_09665 and OH686_09670 overlap by 4 nucleotides
OH686_09670 and OH686_09675 overlap by 4 nucleotides
OH686_09675 and OH686_09680 overlap by 4 nucleotides
OH686_09680 and OH686_09685 overlap by 1 nucleotides
OH686_09665: OH686_09665 - lipopolysaccharide kinase, at 1,974,378 to 1,975,121
_09665
OH686_09670: OH686_09670 - Heptose kinase WapQ, eukaryotic type, at 1,975,118 to 1,975,855
_09670
OH686_09675: OH686_09675 - Lipopolysaccharide core heptose(I) kinase RfaP, at 1,975,852 to 1,976,667
_09675
OH686_09680: OH686_09680 - UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG, at 1,976,664 to 1,977,785
_09680
OH686_09685: OH686_09685 - lipopolysaccharide heptosyltransferase I, at 1,977,785 to 1,978,789
_09685
Group
Condition
OH686
_09665
OH686
_09670
OH686
_09675
OH686
_09680
OH686
_09685
carbon source
octanoate (C)
-3.0
N.D.
N.D.
N.D.
N.D.
carbon source
octanoate (C)
-2.9
N.D.
N.D.
N.D.
N.D.
carbon source
octanoate (C)
-0.6
N.D.
N.D.
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
-0.6
N.D.
N.D.
N.D.
N.D.
carbon source
octanoate (C)
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.4
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
Sorgoleone (C)
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
octanoate (C)
-0.3
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
Sorgoleone (C)
-0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D,L-Malic Acid (C)
-0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Sorgoleone (C)
-0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
+0.1
N.D.
N.D.
N.D.
N.D.
carbon source
Trisodium citrate (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
acetate (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.2
N.D.
N.D.
N.D.
N.D.
carbon source
D-Glucose (C)
+0.3
N.D.
N.D.
N.D.
N.D.
carbon source
octanoate (C)
+0.5
N.D.
N.D.
N.D.
N.D.
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