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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_08895 and OH686_08900 overlap by 8 nucleotides
OH686_08900 and OH686_08905 are separated by 13 nucleotides
OH686_08905 and OH686_08910 are separated by 494 nucleotides
OH686_08910 and OH686_08915 are separated by 23 nucleotides
OH686_08895: OH686_08895 - hypothetical protein, at 1,807,075 to 1,809,234
_08895
OH686_08900: OH686_08900 - hypothetical protein, at 1,809,227 to 1,810,645
_08900
OH686_08905: OH686_08905 - CDS, at 1,810,659 to 1,811,516
_08905
OH686_08910: OH686_08910 - Phytochrome-like protein / Cph2, at 1,812,011 to 1,815,178
_08910
OH686_08915: OH686_08915 - Two-component transcriptional response regulator, LuxR family, at 1,815,202 to 1,815,657
_08915
Group
Condition
OH686
_08895
OH686
_08900
OH686
_08905
OH686
_08910
OH686
_08915
carbon source
acetate (C)
-0.1
+0.1
+0.0
-0.3
-0.4
carbon source
D-Glucose (C)
-0.2
+0.1
+0.0
-0.4
-0.3
carbon source
D-Glucose (C)
+0.1
-0.0
+0.1
-0.5
-0.3
carbon source
D,L-Malic Acid (C)
-0.0
+0.1
+0.1
-0.3
-0.4
carbon source
D-Glucose (C)
-0.1
+0.1
+0.0
-0.3
-0.2
carbon source
D,L-Malic Acid (C)
+0.0
+0.1
+0.1
-0.3
-0.3
carbon source
D,L-Malic Acid (C)
-0.1
+0.2
+0.1
-0.3
-0.3
carbon source
Sorgoleone (C)
-0.0
+0.0
+0.0
-0.1
-0.2
carbon source
D-Glucose (C)
+0.0
+0.2
+0.0
-0.1
-0.4
carbon source
D-Glucose (C)
-0.0
+0.1
+0.1
-0.2
-0.2
carbon source
D-Glucose (C)
-0.0
+0.2
+0.0
-0.2
-0.2
carbon source
Trisodium citrate (C)
-0.2
+0.0
+0.0
-0.1
+0.1
carbon source
D-Glucose (C)
+0.2
+0.0
+0.1
-0.2
-0.3
carbon source
D-Glucose (C)
+0.1
+0.1
+0.1
-0.1
-0.2
carbon source
Trisodium citrate (C)
+0.2
-0.0
+0.1
-0.2
-0.2
carbon source
acetate (C)
-0.0
+0.1
+0.1
-0.0
-0.2
carbon source
Sorgoleone (C)
-0.1
+0.1
+0.1
-0.0
-0.1
carbon source
Trisodium citrate (C)
+0.1
+0.2
+0.0
-0.1
-0.2
carbon source
Sorgoleone (C)
-0.0
+0.2
+0.0
+0.1
-0.1
carbon source
Trisodium citrate (C)
+0.1
+0.1
+0.1
-0.0
-0.1
carbon source
D-Glucose (C)
-0.1
+0.2
+0.1
-0.1
+0.1
carbon source
Trisodium citrate (C)
-0.0
+0.2
+0.1
-0.1
-0.0
carbon source
Trisodium citrate (C)
+0.1
+0.2
+0.0
-0.1
+0.1
carbon source
Trisodium citrate (C)
+0.0
+0.2
+0.0
-0.0
+0.1
carbon source
octanoate (C)
-0.1
+0.3
-0.1
+0.0
+0.2
carbon source
octanoate (C)
+0.1
+0.1
+0.2
+0.0
-0.1
carbon source
octanoate (C)
-0.0
+0.2
+0.2
+0.0
+0.1
carbon source
octanoate (C)
+0.2
+0.3
+0.1
+0.0
-0.0
carbon source
octanoate (C)
+0.1
+0.1
+0.1
+0.1
+0.1
carbon source
octanoate (C)
-0.0
-0.0
+0.1
+0.2
+0.3
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