Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 41 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
OH686_08525 and OH686_08530 overlap by 14 nucleotides
OH686_08530 and OH686_08535 overlap by 1 nucleotides
OH686_08535 and OH686_08540 are separated by 141 nucleotides
OH686_08540 and OH686_08545 overlap by 102 nucleotides
OH686_08525: OH686_08525 - LPS export ABC transporter periplasmic protein LptC, at 1,733,443 to 1,734,012
_08525
OH686_08530: OH686_08530 - lipopolysaccharide transport periplasmic protein LptA, at 1,733,999 to 1,734,544
_08530
OH686_08535: OH686_08535 - LPS export ABC transporter ATP-binding protein, at 1,734,544 to 1,735,269
_08535
OH686_08540: OH686_08540 - RNA polymerase sigma-54 factor, at 1,735,411 to 1,736,913
_08540
OH686_08545: OH686_08545 - hypothetical protein' product='hypothetical protein, at 1,736,812 to 1,737,030
_08545
Group
Condition
OH686
_08525
OH686
_08530
OH686
_08535
OH686
_08540
OH686
_08545
carbon source
Trisodium citrate (C)
-5.2
N.D.
N.D.
N.D.
-0.4
carbon source
octanoate (C)
-3.2
N.D.
N.D.
N.D.
-1.6
carbon source
octanoate (C)
-4.4
N.D.
N.D.
N.D.
-0.3
carbon source
Trisodium citrate (C)
-4.3
N.D.
N.D.
N.D.
-0.2
carbon source
D-Glucose (C)
-4.3
N.D.
N.D.
N.D.
-0.1
carbon source
octanoate (C)
-4.1
N.D.
N.D.
N.D.
-0.2
carbon source
acetate (C)
-3.1
N.D.
N.D.
N.D.
-0.7
carbon source
octanoate (C)
-1.8
N.D.
N.D.
N.D.
-1.6
carbon source
D-Glucose (C)
-2.5
N.D.
N.D.
N.D.
-0.9
carbon source
octanoate (C)
-3.4
N.D.
N.D.
N.D.
+0.1
carbon source
D-Glucose (C)
-2.7
N.D.
N.D.
N.D.
-0.5
carbon source
Trisodium citrate (C)
-2.3
N.D.
N.D.
N.D.
-0.7
carbon source
acetate (C)
-3.0
N.D.
N.D.
N.D.
+0.0
carbon source
D-Glucose (C)
-2.7
N.D.
N.D.
N.D.
-0.1
carbon source
Trisodium citrate (C)
-2.7
N.D.
N.D.
N.D.
-0.1
carbon source
octanoate (C)
-2.5
N.D.
N.D.
N.D.
-0.3
carbon source
D-Glucose (C)
-2.8
N.D.
N.D.
N.D.
+0.3
carbon source
D-Glucose (C)
-2.5
N.D.
N.D.
N.D.
+0.0
carbon source
acetate (C)
-2.1
N.D.
N.D.
N.D.
-0.3
carbon source
D-Glucose (C)
-2.4
N.D.
N.D.
N.D.
+0.1
carbon source
Trisodium citrate (C)
-1.8
N.D.
N.D.
N.D.
-0.4
carbon source
D,L-Malic Acid (C)
-1.3
N.D.
N.D.
N.D.
-0.9
carbon source
Trisodium citrate (C)
-1.7
N.D.
N.D.
N.D.
-0.4
carbon source
D,L-Malic Acid (C)
-1.7
N.D.
N.D.
N.D.
-0.2
carbon source
Trisodium citrate (C)
-1.6
N.D.
N.D.
N.D.
-0.2
carbon source
acetate (C)
-1.7
N.D.
N.D.
N.D.
-0.0
carbon source
acetate (C)
-1.7
N.D.
N.D.
N.D.
+0.0
carbon source
Sorgoleone (C)
-1.3
N.D.
N.D.
N.D.
-0.3
carbon source
acetate (C)
-1.8
N.D.
N.D.
N.D.
+0.2
carbon source
D-Glucose (C)
-1.4
N.D.
N.D.
N.D.
+0.2
remove
OH686_08525
plot
remove
OH686_08530
plot
remove
OH686_08535
remove
OH686_08540
plot
remove
OH686_08545
plot