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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_08200 and OH686_08205 are separated by 0 nucleotides
OH686_08205 and OH686_08210 are separated by 107 nucleotides
OH686_08210 and OH686_08215 are separated by 149 nucleotides
OH686_08215 and OH686_08220 overlap by 4 nucleotides
OH686_08200: OH686_08200 - AmpG permease, at 1,668,187 to 1,669,797
_08200
OH686_08205: OH686_08205 - Small-conductance mechanosensitive channel, at 1,669,798 to 1,670,634
_08205
OH686_08210: OH686_08210 - UPF0234 protein Yitk, at 1,670,742 to 1,671,221
_08210
OH686_08215: OH686_08215 - COG3706: Response regulator containing a CheY-like receiver domain and a GGDEF domain, at 1,671,371 to 1,672,336
_08215
OH686_08220: OH686_08220 - 2-dehydropantoate 2-reductase , at 1,672,333 to 1,673,244
_08220
Group
Condition
OH686
_08200
OH686
_08205
OH686
_08210
OH686
_08215
OH686
_08220
carbon source
octanoate (C)
-2.2
-0.1
-0.1
+0.3
-2.4
carbon source
octanoate (C)
-2.3
+0.0
-0.3
+0.0
-0.9
carbon source
D-Glucose (C)
-1.2
-0.1
-0.4
-0.2
-1.3
carbon source
D-Glucose (C)
-1.1
-0.3
+0.1
-0.2
-1.6
carbon source
D-Glucose (C)
-1.1
-0.1
-0.1
-0.2
-1.6
carbon source
octanoate (C)
-2.1
+0.3
+0.0
+0.3
-1.5
carbon source
octanoate (C)
-2.3
+0.4
+0.2
+0.0
-1.2
carbon source
D-Glucose (C)
-1.1
+0.0
-0.2
-0.2
-1.2
carbon source
octanoate (C)
-2.7
+1.7
-0.0
+0.2
-1.4
carbon source
D-Glucose (C)
-0.7
-0.0
-0.2
+0.0
-0.5
carbon source
Sorgoleone (C)
-0.5
-0.2
-0.1
+0.1
-0.6
carbon source
D-Glucose (C)
-0.8
+0.0
-0.2
-0.1
-0.3
carbon source
acetate (C)
-1.0
+0.0
-0.1
+0.1
-0.3
carbon source
octanoate (C)
-1.0
+1.0
+0.2
+0.3
-1.6
carbon source
Sorgoleone (C)
-0.5
-0.1
+0.1
+0.0
-0.6
carbon source
D-Glucose (C)
-0.8
+0.0
+0.1
-0.1
-0.3
carbon source
D-Glucose (C)
-0.8
+0.1
+0.0
-0.0
-0.3
carbon source
acetate (C)
-1.1
-0.1
+0.0
+0.1
+0.0
carbon source
acetate (C)
-0.8
-0.1
-0.1
-0.0
+0.1
carbon source
acetate (C)
-0.9
-0.0
+0.0
+0.1
-0.0
carbon source
acetate (C)
-0.8
-0.2
+0.2
+0.1
-0.2
carbon source
Trisodium citrate (C)
-0.5
-0.0
-0.2
+0.1
-0.3
carbon source
Trisodium citrate (C)
-0.8
-0.1
+0.2
+0.1
-0.2
carbon source
Trisodium citrate (C)
-0.5
-0.2
+0.3
+0.1
-0.4
carbon source
Sorgoleone (C)
-0.5
-0.0
+0.1
+0.2
-0.5
carbon source
acetate (C)
-0.9
+0.1
-0.2
+0.2
+0.0
carbon source
D-Glucose (C)
-0.7
+0.2
+0.2
+0.0
-0.3
carbon source
Trisodium citrate (C)
-0.5
+0.2
-0.1
-0.0
-0.3
carbon source
Trisodium citrate (C)
-0.4
+0.2
+0.2
+0.1
-0.6
carbon source
acetate (C)
-0.9
+0.1
+0.2
+0.1
+0.3
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