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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_07455 and OH686_07460 overlap by 1 nucleotides
OH686_07460 and OH686_07465 are separated by 127 nucleotides
OH686_07465 and OH686_07470 are separated by 55 nucleotides
OH686_07470 and OH686_07475 overlap by 4 nucleotides
OH686_07455: OH686_07455 - Response regulator c-di-GMP phosphodiesterase, RpfG family, at 1,514,834 to 1,516,018
_07455
OH686_07460: OH686_07460 - hypothetical protein, at 1,516,018 to 1,519,518
_07460
OH686_07465: OH686_07465 - Methylphosphotriester-DNA--protein-cysteine S-methyltransferase / ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase , at 1,519,646 to 1,520,680
_07465
OH686_07470: OH686_07470 - hypothetical protein, at 1,520,736 to 1,521,038
_07470
OH686_07475: OH686_07475 - tRNA uridine 5-oxyacetic acid(34) methyltransferase , at 1,521,035 to 1,521,784
_07475
Group
Condition
OH686
_07455
OH686
_07460
OH686
_07465
OH686
_07470
OH686
_07475
carbon source
octanoate (C)
-0.0
-0.3
-0.2
-0.3
-0.0
carbon source
octanoate (C)
-0.0
-0.0
-0.2
-0.2
-0.1
carbon source
octanoate (C)
+0.0
-0.0
-0.3
-0.2
-0.0
carbon source
Trisodium citrate (C)
+0.0
-0.0
-0.2
-0.3
-0.1
carbon source
Sorgoleone (C)
+0.2
-0.0
-0.2
-0.0
-0.0
carbon source
acetate (C)
-0.1
+0.0
-0.1
-0.1
+0.1
carbon source
D-Glucose (C)
+0.0
+0.1
-0.1
-0.1
-0.0
carbon source
octanoate (C)
+0.5
-0.1
-0.2
+0.3
-0.5
carbon source
Sorgoleone (C)
+0.1
-0.0
-0.1
+0.2
-0.2
carbon source
D,L-Malic Acid (C)
+0.1
-0.0
-0.1
-0.1
+0.1
carbon source
acetate (C)
+0.0
-0.0
-0.3
+0.2
+0.1
carbon source
D-Glucose (C)
-0.1
-0.0
-0.1
+0.1
+0.1
carbon source
D,L-Malic Acid (C)
-0.1
-0.1
-0.0
+0.1
+0.2
carbon source
D-Glucose (C)
-0.0
-0.0
-0.1
+0.2
-0.0
carbon source
Trisodium citrate (C)
+0.0
-0.1
-0.1
+0.2
+0.1
carbon source
acetate (C)
-0.1
+0.0
+0.1
+0.1
+0.0
carbon source
acetate (C)
+0.1
-0.1
+0.0
+0.2
-0.1
carbon source
acetate (C)
+0.1
+0.0
+0.0
-0.1
+0.1
carbon source
D-Glucose (C)
+0.0
-0.1
-0.1
+0.2
+0.1
carbon source
D-Glucose (C)
+0.0
-0.0
+0.0
+0.2
+0.1
carbon source
D-Glucose (C)
+0.1
-0.1
+0.1
+0.2
-0.0
carbon source
acetate (C)
+0.0
-0.0
-0.2
+0.2
+0.2
carbon source
D,L-Malic Acid (C)
+0.0
-0.0
-0.1
+0.4
+0.1
carbon source
octanoate (C)
-0.0
+0.0
+0.0
+0.5
-0.2
carbon source
Trisodium citrate (C)
+0.1
-0.0
-0.0
+0.2
+0.0
carbon source
Trisodium citrate (C)
+0.0
-0.0
+0.0
+0.3
+0.0
carbon source
D-Glucose (C)
-0.0
+0.0
-0.1
+0.4
+0.1
carbon source
D-Glucose (C)
-0.1
+0.1
+0.1
+0.2
+0.2
carbon source
octanoate (C)
+0.0
+0.0
+0.3
+0.2
+0.0
carbon source
acetate (C)
+0.2
-0.0
+0.0
+0.3
+0.2
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