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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_07355 and OH686_07360 are separated by 67 nucleotides
OH686_07360 and OH686_07365 are separated by 11 nucleotides
OH686_07365 and OH686_07370 are separated by 97 nucleotides
OH686_07370 and OH686_07375 are separated by 12 nucleotides
OH686_07355: OH686_07355 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 1,491,572 to 1,495,441
_07355
OH686_07360: OH686_07360 - hypothetical protein, at 1,495,509 to 1,495,697
_07360
OH686_07365: OH686_07365 - Multidrug resistance transporter, Bcr/CflA family, at 1,495,709 to 1,496,896
_07365
OH686_07370: OH686_07370 - RND efflux system, inner membrane transporter, at 1,496,994 to 1,500,134
_07370
OH686_07375: OH686_07375 - RND efflux system, membrane fusion protein, at 1,500,147 to 1,501,295
_07375
Group
Condition
OH686
_07355
OH686
_07360
OH686
_07365
OH686
_07370
OH686
_07375
carbon source
acetate (C)
-0.0
-0.6
+0.0
-0.1
-0.1
carbon source
acetate (C)
+0.0
-0.9
+0.0
-0.0
+0.0
carbon source
acetate (C)
+0.0
-0.6
-0.1
-0.0
-0.1
carbon source
Trisodium citrate (C)
-0.0
-0.6
+0.1
-0.1
-0.1
carbon source
acetate (C)
-0.0
-0.4
+0.2
-0.1
-0.2
carbon source
D,L-Malic Acid (C)
-0.0
-0.6
+0.1
-0.0
-0.0
carbon source
D,L-Malic Acid (C)
-0.1
-0.6
+0.2
-0.1
-0.0
carbon source
D-Glucose (C)
-0.1
-0.6
-0.0
+0.1
+0.1
carbon source
Sorgoleone (C)
-0.0
-0.4
-0.1
-0.0
-0.0
carbon source
Trisodium citrate (C)
+0.0
-0.5
+0.2
-0.1
-0.1
carbon source
Trisodium citrate (C)
+0.0
-0.6
+0.0
-0.0
+0.1
carbon source
acetate (C)
-0.1
-0.4
+0.2
-0.0
-0.0
carbon source
D-Glucose (C)
-0.0
-0.4
+0.1
-0.0
+0.1
carbon source
D-Glucose (C)
-0.0
-0.4
+0.2
+0.1
-0.1
carbon source
Trisodium citrate (C)
+0.0
-0.2
-0.1
-0.1
+0.0
carbon source
D-Glucose (C)
-0.1
-0.5
+0.1
+0.1
+0.1
carbon source
acetate (C)
-0.0
+0.1
-0.1
-0.1
-0.1
carbon source
Sorgoleone (C)
-0.0
-0.2
+0.1
-0.0
+0.2
carbon source
acetate (C)
-0.0
+0.3
-0.1
-0.0
-0.0
carbon source
D-Glucose (C)
-0.0
-0.2
+0.1
+0.1
+0.2
carbon source
D,L-Malic Acid (C)
-0.1
+0.3
+0.1
+0.0
-0.0
carbon source
D-Glucose (C)
-0.0
+0.4
-0.1
-0.0
+0.1
carbon source
D-Glucose (C)
-0.1
+0.5
+0.0
+0.0
+0.0
carbon source
octanoate (C)
-0.2
-0.4
-0.3
-0.2
+1.8
carbon source
D-Glucose (C)
+0.0
+0.5
+0.0
+0.0
+0.2
carbon source
octanoate (C)
-0.1
+0.1
+0.2
+0.2
+0.8
carbon source
octanoate (C)
-0.1
-0.2
+0.2
+0.2
+1.2
carbon source
octanoate (C)
-0.1
+0.3
-0.1
+0.2
+1.0
carbon source
octanoate (C)
-0.1
-0.0
+0.3
+0.3
+1.1
carbon source
octanoate (C)
-0.1
+0.8
+0.1
-0.2
+1.3
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