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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_06870 and OH686_06875 are separated by 221 nucleotides
OH686_06875 and OH686_06880 are separated by 386 nucleotides
OH686_06880 and OH686_06885 overlap by 4 nucleotides
OH686_06885 and OH686_06890 are separated by 125 nucleotides
OH686_06870: OH686_06870 - hypothetical protein, at 1,399,371 to 1,401,335
_06870
OH686_06875: OH686_06875 - Diguanylate cyclase, at 1,401,557 to 1,403,179
_06875
OH686_06880: OH686_06880 - hypothetical protein, at 1,403,566 to 1,404,474
_06880
OH686_06885: OH686_06885 - CDS, at 1,404,471 to 1,405,637
_06885
OH686_06890: OH686_06890 - putative membrane protein, at 1,405,763 to 1,406,497
_06890
Group
Condition
OH686
_06870
OH686
_06875
OH686
_06880
OH686
_06885
OH686
_06890
carbon source
D-Glucose (C)
+0.1
+0.0
-0.3
-0.2
-0.1
carbon source
octanoate (C)
+0.0
-0.1
+0.0
-0.4
-0.0
carbon source
Trisodium citrate (C)
-0.2
+0.1
-0.0
-0.0
-0.2
carbon source
D-Glucose (C)
-0.0
-0.1
-0.0
+0.1
-0.2
carbon source
Sorgoleone (C)
+0.1
+0.0
-0.2
+0.0
-0.0
carbon source
acetate (C)
+0.0
+0.1
-0.0
+0.1
-0.3
carbon source
D-Glucose (C)
+0.0
+0.1
-0.3
+0.2
-0.0
carbon source
octanoate (C)
+0.0
+0.2
-0.1
-0.1
-0.0
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.0
-0.1
-0.0
carbon source
Trisodium citrate (C)
+0.0
+0.0
-0.2
+0.2
+0.0
carbon source
D-Glucose (C)
+0.1
+0.0
-0.1
+0.1
-0.1
carbon source
Trisodium citrate (C)
-0.1
-0.0
-0.0
+0.2
+0.0
carbon source
D-Glucose (C)
-0.0
-0.0
-0.1
+0.3
-0.1
carbon source
octanoate (C)
+0.2
-0.1
+0.3
-0.1
-0.2
carbon source
D-Glucose (C)
+0.0
+0.1
-0.1
+0.2
-0.1
carbon source
octanoate (C)
-0.1
+0.2
+0.1
+0.1
-0.1
carbon source
Sorgoleone (C)
+0.0
+0.1
+0.1
+0.1
-0.1
carbon source
acetate (C)
+0.0
-0.0
+0.0
+0.2
-0.1
carbon source
Trisodium citrate (C)
-0.1
-0.0
-0.1
+0.4
-0.0
carbon source
acetate (C)
-0.0
+0.1
-0.2
+0.2
+0.1
carbon source
D-Glucose (C)
+0.1
+0.0
-0.0
+0.2
-0.1
carbon source
Trisodium citrate (C)
+0.0
+0.1
-0.2
+0.2
+0.0
carbon source
D-Glucose (C)
+0.0
+0.0
+0.2
+0.1
-0.1
carbon source
D-Glucose (C)
+0.0
+0.0
+0.0
+0.2
-0.1
carbon source
octanoate (C)
+0.2
+0.3
+0.2
+0.0
-0.4
carbon source
acetate (C)
+0.0
+0.0
-0.0
+0.2
-0.0
carbon source
acetate (C)
+0.1
+0.0
-0.0
+0.1
+0.1
carbon source
acetate (C)
+0.0
+0.2
-0.0
+0.1
-0.0
carbon source
octanoate (C)
+0.1
+0.1
+0.1
+0.3
-0.2
carbon source
acetate (C)
+0.1
+0.0
+0.2
+0.2
+0.1
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