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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_06580 and OH686_06585 are separated by 230 nucleotides
OH686_06585 and OH686_06590 are separated by 90 nucleotides
OH686_06590 and OH686_06595 are separated by 2 nucleotides
OH686_06595 and OH686_06600 overlap by 4 nucleotides
OH686_06580: OH686_06580 - Cold shock protein of CSP family, at 1,336,593 to 1,336,802
_06580
OH686_06585: OH686_06585 - hypothetical protein, at 1,337,033 to 1,338,010
_06585
OH686_06590: OH686_06590 - Gliding motility-associated ABC transporter substrate-binding protein GldG, at 1,338,101 to 1,339,933
_06590
OH686_06595: OH686_06595 - Gliding motility-associated ABC transporter permease protein GldF, at 1,339,936 to 1,340,667
_06595
OH686_06600: OH686_06600 - Gliding motility-associated ABC transporter ATP-binding protein GldA, at 1,340,664 to 1,341,584
_06600
Group
Condition
OH686
_06580
OH686
_06585
OH686
_06590
OH686
_06595
OH686
_06600
carbon source
Sorgoleone (C)
+0.2
+0.1
-2.5
-2.4
-2.8
carbon source
Sorgoleone (C)
+0.4
+0.4
-2.2
-2.4
-3.5
carbon source
Sorgoleone (C)
+0.3
+0.2
-1.9
-2.3
-2.2
carbon source
Sorgoleone (C)
+0.2
+0.1
-2.2
-2.2
-1.6
carbon source
octanoate (C)
-0.1
+0.5
-1.5
-1.8
-1.2
carbon source
octanoate (C)
-0.5
+0.5
-0.3
-0.2
+0.1
carbon source
Trisodium citrate (C)
+0.3
-0.2
-0.1
-0.2
+0.2
carbon source
octanoate (C)
+0.2
-1.3
+0.3
+0.4
+0.3
carbon source
octanoate (C)
-0.9
+0.1
+0.5
+0.7
-0.0
carbon source
octanoate (C)
-0.5
+0.0
+0.3
+0.2
+0.4
carbon source
acetate (C)
+0.4
+0.5
-0.0
-0.0
-0.4
carbon source
D,L-Malic Acid (C)
+0.2
+0.3
+0.2
+0.0
-0.2
carbon source
D-Glucose (C)
+0.5
+0.2
-0.2
+0.1
-0.1
carbon source
D-Glucose (C)
+0.4
+0.3
+0.0
-0.1
+0.1
carbon source
Trisodium citrate (C)
+0.5
+0.4
-0.0
+0.1
-0.2
carbon source
Trisodium citrate (C)
+0.4
+0.4
+0.1
-0.1
+0.0
carbon source
Trisodium citrate (C)
+0.4
+0.3
-0.0
+0.2
-0.0
carbon source
D-Glucose (C)
+0.4
+0.5
-0.1
+0.1
+0.0
carbon source
D-Glucose (C)
-0.1
+0.5
+0.1
+0.2
+0.1
carbon source
D-Glucose (C)
+0.2
-0.0
+0.3
+0.2
+0.3
carbon source
acetate (C)
+0.3
+0.4
-0.0
+0.1
+0.2
carbon source
acetate (C)
+0.4
+0.4
-0.0
-0.0
+0.2
carbon source
D,L-Malic Acid (C)
+0.3
+0.4
+0.1
-0.2
+0.4
carbon source
Trisodium citrate (C)
+0.1
+0.4
-0.1
+0.1
+0.4
carbon source
acetate (C)
+0.4
+0.4
+0.0
+0.1
+0.2
carbon source
D-Glucose (C)
+0.1
+0.0
+0.4
+0.3
+0.5
carbon source
D-Glucose (C)
+0.1
+0.2
+0.3
+0.5
+0.5
carbon source
D-Glucose (C)
+0.4
+0.1
+0.4
+0.5
+0.3
carbon source
D-Glucose (C)
+0.2
+0.5
+0.5
+0.3
+0.3
carbon source
octanoate (C)
+0.5
+0.1
+0.1
+0.6
+1.4
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