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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_06335 and OH686_06340 are separated by 80 nucleotides
OH686_06340 and OH686_06345 are separated by 31 nucleotides
OH686_06345 and OH686_06350 are separated by 58 nucleotides
OH686_06350 and OH686_06355 are separated by 235 nucleotides
OH686_06335: OH686_06335 - L-lysine permease, at 1,283,140 to 1,283,769
_06335
OH686_06340: OH686_06340 - D-3-phosphoglycerate dehydrogenase , at 1,283,850 to 1,284,818
_06340
OH686_06345: OH686_06345 - 16S rRNA (guanine(1207)-N(2))-methyltransferase , at 1,284,850 to 1,285,845
_06345
OH686_06350: OH686_06350 - Lysine-specific permease, at 1,285,904 to 1,287,364
_06350
OH686_06355: OH686_06355 - Putative transmembrane protein, at 1,287,600 to 1,288,184
_06355
Group
Condition
OH686
_06335
OH686
_06340
OH686
_06345
OH686
_06350
OH686
_06355
carbon source
octanoate (C)
+0.3
-0.4
-1.8
-0.1
N.D.
carbon source
octanoate (C)
+0.0
-0.5
-1.0
+0.0
N.D.
carbon source
octanoate (C)
+0.1
-0.1
-1.1
-0.0
N.D.
carbon source
Sorgoleone (C)
-0.1
-0.1
-0.6
-0.1
N.D.
carbon source
octanoate (C)
-0.1
-0.3
-0.3
-0.2
N.D.
carbon source
Sorgoleone (C)
+0.1
-0.0
-0.9
-0.0
N.D.
carbon source
acetate (C)
-0.0
-0.3
-0.3
-0.0
N.D.
carbon source
octanoate (C)
+0.2
-0.8
-0.0
+0.1
N.D.
carbon source
acetate (C)
+0.2
-0.3
-0.5
+0.0
N.D.
carbon source
acetate (C)
-0.1
-0.1
-0.3
+0.0
N.D.
carbon source
acetate (C)
+0.2
-0.3
-0.4
-0.0
N.D.
carbon source
Sorgoleone (C)
-0.1
-0.2
-0.3
+0.0
N.D.
carbon source
acetate (C)
+0.1
-0.4
-0.2
-0.0
N.D.
carbon source
acetate (C)
-0.0
-0.4
+0.1
-0.0
N.D.
carbon source
Trisodium citrate (C)
+0.1
-0.2
-0.3
+0.0
N.D.
carbon source
Trisodium citrate (C)
+0.3
-0.1
-0.4
-0.0
N.D.
carbon source
acetate (C)
+0.1
-0.2
-0.2
-0.1
N.D.
carbon source
acetate (C)
+0.3
-0.2
-0.2
-0.1
N.D.
carbon source
D-Glucose (C)
-0.0
+0.3
-0.5
+0.0
N.D.
carbon source
D,L-Malic Acid (C)
+0.1
+0.1
-0.2
+0.0
N.D.
carbon source
Trisodium citrate (C)
+0.2
-0.3
+0.2
-0.1
N.D.
carbon source
D-Glucose (C)
+0.2
+0.3
-0.3
-0.0
N.D.
carbon source
D-Glucose (C)
+0.3
+0.2
-0.3
+0.0
N.D.
carbon source
D-Glucose (C)
+0.2
+0.3
+0.0
-0.0
N.D.
carbon source
D-Glucose (C)
+0.2
+0.4
-0.1
-0.0
N.D.
carbon source
D,L-Malic Acid (C)
+0.2
+0.1
+0.2
-0.0
N.D.
carbon source
D-Glucose (C)
+0.1
+0.8
-0.4
+0.1
N.D.
carbon source
D-Glucose (C)
-0.1
+0.9
+0.0
+0.0
N.D.
carbon source
D-Glucose (C)
-0.3
+0.9
+0.2
+0.1
N.D.
carbon source
D-Glucose (C)
-0.0
+0.9
+0.0
+0.1
N.D.
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