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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
OH686_05905 and OH686_05910 overlap by 4 nucleotides
OH686_05910 and OH686_05915 are separated by 2 nucleotides
OH686_05915 and OH686_05920 are separated by 10 nucleotides
OH686_05920 and OH686_05925 are separated by 177 nucleotides
OH686_05905: OH686_05905 - Urea carboxylase-related ABC transporter, permease protein, at 1,190,761 to 1,191,576
_05905
OH686_05910: OH686_05910 - Urea carboxylase-related ABC transporter, ATP-binding protein, at 1,191,573 to 1,192,355
_05910
OH686_05915: OH686_05915 - Urea carboxylase-related aminomethyltransferase, at 1,192,358 to 1,193,086
_05915
OH686_05920: OH686_05920 - Urea carboxylase-related aminomethyltransferase, at 1,193,097 to 1,193,732
_05920
OH686_05925: OH686_05925 - urea carboxylase, at 1,193,910 to 1,197,509
_05925
Group
Condition
OH686
_05905
OH686
_05910
OH686
_05915
OH686
_05920
OH686
_05925
carbon source
D-Glucose (C)
-0.2
+0.0
-0.0
-0.1
+0.1
carbon source
D,L-Malic Acid (C)
-0.1
+0.4
-0.3
-0.1
-0.0
carbon source
Trisodium citrate (C)
+0.2
+0.1
-0.1
-0.0
-0.1
carbon source
Trisodium citrate (C)
-0.1
+0.3
-0.2
+0.1
-0.1
carbon source
D-Glucose (C)
+0.0
+0.4
-0.1
-0.0
-0.1
carbon source
Sorgoleone (C)
-0.1
+0.4
-0.1
+0.1
-0.1
carbon source
acetate (C)
+0.0
+0.4
-0.1
+0.0
-0.0
carbon source
acetate (C)
-0.1
+0.6
-0.1
-0.0
-0.0
carbon source
octanoate (C)
+0.1
+0.0
+0.3
-0.2
+0.0
carbon source
Sorgoleone (C)
+0.1
+0.4
-0.1
-0.1
-0.0
carbon source
acetate (C)
+0.1
+0.4
-0.2
+0.0
-0.0
carbon source
acetate (C)
+0.1
+0.4
-0.1
-0.0
-0.1
carbon source
Trisodium citrate (C)
-0.1
+0.4
+0.1
-0.0
-0.1
carbon source
D-Glucose (C)
+0.0
+0.4
-0.2
+0.0
+0.0
carbon source
D-Glucose (C)
+0.1
+0.3
+0.1
-0.1
-0.0
carbon source
acetate (C)
-0.1
+0.5
-0.0
-0.1
-0.0
carbon source
octanoate (C)
+0.1
+0.4
-0.2
+0.0
+0.0
carbon source
Trisodium citrate (C)
-0.0
+0.7
-0.3
+0.0
+0.0
carbon source
Trisodium citrate (C)
+0.0
+0.4
+0.1
-0.1
-0.0
carbon source
D-Glucose (C)
+0.1
+0.5
-0.1
-0.1
-0.0
carbon source
Trisodium citrate (C)
-0.2
+0.6
+0.1
-0.0
+0.0
carbon source
Trisodium citrate (C)
-0.1
+0.5
+0.0
-0.0
+0.0
carbon source
Trisodium citrate (C)
+0.1
+0.5
-0.0
-0.0
-0.0
carbon source
Sorgoleone (C)
+0.0
+0.4
+0.0
-0.0
+0.1
carbon source
octanoate (C)
+0.1
+0.6
-0.2
+0.0
+0.0
carbon source
D-Glucose (C)
+0.1
+0.4
+0.1
-0.0
+0.0
carbon source
octanoate (C)
-0.1
+0.4
+0.2
+0.1
+0.1
carbon source
D-Glucose (C)
+0.2
+0.6
+0.0
-0.0
-0.1
carbon source
octanoate (C)
-0.2
+0.7
+0.5
+0.0
-0.0
carbon source
octanoate (C)
+0.1
+0.7
+0.1
+0.1
+0.1
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